fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os006261 not found in 163aa AT4G34590.1 1st_1st 0.442687747 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G34590.1     MESSS-------SGTTSSTIQTSSGSEE---SLMEQRKRKRMLSNRESARRSRMKKQKLL
Os006261_Os02t0 MASSSGSGGSAVSAATAAAGGSSSAAEEELRALMEQRRAKRMLSNRESARRSRMRKQRHL
                * ***       *.:*:::  :**.:**   :*****: ***************:**: *

AT4G34590.1     DDLTAQVNHLKKENTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEFLD
Os006261_Os02t0 DDLTAQVAHLRRENAHVATALGLTTQGLLAVDAENAVLRTQAAELAARLASLNDIL----
                ******* **::**:.:.*::.:***  *:*:***:***:*  **  ** *****:    

AT4G34590.1     SSNNNNNN--------NMGMCSNPLVGLEC---DDFFVNQMNMSYIMNQPLMASSDALMY
Os006261_Os02t0 SCINTNGAAAAAAAALTVAAATDPLLAFDSAAFDDLF---------------RSSPELFQ
                *. *.*.         .:. .::**:.::.   **:*                **  *: 

AT4G34590.1     --
Os006261_Os02t0 LC
BoxShade v3.31 C (beta, 970507) Output
AT4G34590.1     M E S S S - - - - - - - S G T T S S T I Q T S S G S E E - - - S L M E Q R K R K R M L S N R E S A R R S R M K K Q K L L
Os006261_Os02t0    M A S S S G S G G S A V S A A T A A A G G S S S A A E E E L R A L M E Q R R A K R M L S N R E S A R R S R M R K Q R H L
 
AT4G34590.1     D D L T A Q V N H L K K E N T E I V T S V S I T T Q H Y L T V E A E N S V L R A Q L D E L N H R L Q S L N D I I E F L D
Os006261_Os02t0    D D L T A Q V A H L R R E N A H V A T A L G L T T Q G L L A V D A E N A V L R T Q A A E L A A R L A S L N D I L - - - -
 
AT4G34590.1     S S N N N N N N - - - - - - - - N M G M C S N P L V G L E C - - - D D F F V N Q M N M S Y I M N Q P L M A S S D A L M Y
Os006261_Os02t0    S C I N T N G A A A A A A A A L T V A A A T D P L L A F D S A A F D D L F - - - - - - - - - - - - - - - R S S P E L F Q
 
AT4G34590.1     - -
Os006261_Os02t0    L C
 
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