fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026717 not found in 283aa AT4G34590.1 1st_1st 0.422924901 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G34590.1     -------------------MESSSSGTTSSTIQTSSGSEESLMEQRKRK-----------
Sb026717_Sorbi1 GFLQRERELGLSVGGDGGAGRGGGHGGGAARAHGAAARQADAVQPRVRAAVADAQAAPPR
                                    .... *  ::  : ::. : . :: * *            

AT4G34590.1     ------RMLSNRESARRSRMKKQKLLDDLTAQVNHLKKENTE---------IVTSVSITT
Sb026717_Sorbi1 RAHRAGRAPAPRERARRHRAR--------THHAGTPRRRRRERRPPHPGRRARRAPRFPQ
                      *  : ** *** * :        * :..  ::.. *            :  :. 

AT4G34590.1     QHYLTVEAENSVLRAQLDEL-------------------NHRLQSLNDII--EF------
Sb026717_Sorbi1 RHPRLHEHQRRCGRRRRRRLRLPHSRRRFFLRPLPRLRRRHRLGRPPQILPREYVPALLA
                :*    * :.   * :  .*                   .***    :*:  *:      

AT4G34590.1     ----LDSSNNNNNNNMGMCSNPLVGLECDDFFVNQMNMSYIMNQPLMASSDALMY
Sb026717_Sorbi1 PSSRLKSPWQHKASRGGREKKHIFLVFC--FWCFRLVIC----------------
                    *.*. ::: .. *  .: :. : *  *:  :: :.
BoxShade v3.31 C (beta, 970507) Output
AT4G34590.1     - - - - - - - - - - - - - - - - - - - M E S S S S G T T S S T I Q T S S G S E E S L M E Q R K R K - - - - - - - - - - -
Sb026717_Sorbi1    G F L Q R E R E L G L S V G G D G G A G R G G G H G G G A A R A H G A A A R Q A D A V Q P R V R A A V A D A Q A A P P R
 
AT4G34590.1     - - - - - - R M L S N R E S A R R S R M K K Q K L L D D L T A Q V N H L K K E N T E - - - - - - - - - I V T S V S I T T
Sb026717_Sorbi1    R A H R A G R A P A P R E R A R R H R A R - - - - - - - - T H H A G T P R R R R R E R R P P H P G R R A R R A P R F P Q
 
AT4G34590.1     Q H Y L T V E A E N S V L R A Q L D E L - - - - - - - - - - - - - - - - - - - N H R L Q S L N D I I - - E F - - - - - -
Sb026717_Sorbi1    R H P R L H E H Q R R C G R R R R R R L R L P H S R R R F F L R P L P R L R R R H R L G R P P Q I L P R E Y V P A L L A
 
AT4G34590.1     - - - - L D S S N N N N N N N M G M C S N P L V G L E C D D F F V N Q M N M S Y I M N Q P L M A S S D A L M Y
Sb026717_Sorbi1    P S S R L K S P W Q H K A S R G G R E K K H I F L V F C - - F W C F R L V I C - - - - - - - - - - - - - - - -
 
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