fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm032682 not found in 160aa AT4G34590.1 1st_1st 0.581027667 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G34590.1     MESSSSGTTSSTIQTSSGSEESL---MEQRKRKRMLSNRESARRSRMKKQKLLDDLTAQV
gm032682_Glyma1 MASSSGTSSGSSLLQNSGSEEDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQV
                * ***. ::.*::  .*****.*   *:*******:***********:*** ****.:**

AT4G34590.1     NHLKKENTEIVTSVSITTQHYLTVEAENSVLRAQLDELNHRLQSLNDIIEFLDSSN----
gm032682_Glyma1 AQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIVDVLNATTVAGF
                 :*:*** :*:***.****:**:***********:.**.***:***:*::.*:::.    

AT4G34590.1     -------------NNNNNNMGMCSNPLVGLECDDFFVNQMNMSYIMNQPLMASSDALMY
gm032682_Glyma1 GAAATSSTFVEPINNNS------------------FFNPLNMGY-LNHPIMASADILQY
                             ***.                  *.* :**.* :*:*:***:* * *
BoxShade v3.31 C (beta, 970507) Output
AT4G34590.1     M E S S S S G T T S S T I Q T S S G S E E S L - - - M E Q R K R K R M L S N R E S A R R S R M K K Q K L L D D L T A Q V
gm032682_Glyma1    M A S S S G T S S G S S L L Q N S G S E E D L Q A V M D Q R K R K R M I S N R E S A R R S R M R K Q K H L D D L V S Q V
 
AT4G34590.1     N H L K K E N T E I V T S V S I T T Q H Y L T V E A E N S V L R A Q L D E L N H R L Q S L N D I I E F L D S S N - - - -
gm032682_Glyma1    A Q L R K E N Q Q I L T S V N I T T Q Q Y L S V E A E N S V L R A Q V G E L S H R L E S L N E I V D V L N A T T V A G F
 
AT4G34590.1     - - - - - - - - - - - - - N N N N N N M G M C S N P L V G L E C D D F F V N Q M N M S Y I M N Q P L M A S S D A L M Y
gm032682_Glyma1    G A A A T S S T F V E P I N N N S - - - - - - - - - - - - - - - - - - F F N P L N M G Y - L N H P I M A S A D I L Q Y
 
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