fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34990.1 VVEERCLDLNLELRIS at 181/274 in AT4G34990.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031046 VPRCPDLNLDLCISPP in 216/452 AT4G34990.1 1st_1st 0.560784313 Ia
Gm032581 LERCPDLNLELTISPP in 173/253 AT4G34990.1 1st_1st 0.621568627 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G34990.1     -MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRW--
Sb031046_Sorbi1 LPYPNPTSQEPNQ-----TKEKNSAAGHFDRSYGHG------------RLIHSLHLEASE
gm032581_Glyma1 -MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRW--
                    .* .:: :      ***::.    : :::*.*            *  :* :*.   

AT4G34990.1     INYLRPDLKR-------------GNFTLEE-------------------DD--LIIKLHS
Sb031046_Sorbi1 VEHAGPEPQEAVVAVAAAAAAPGGSFLDAQAAAEAEAAAMAGLQHLPLDDDGGLEVQL--
gm032581_Glyma1 INYLRPDLKR-------------GNFTEEE-------------------DE--LIIKLHS
                :::  *: :.             *.*   :                   *:  * ::*  

AT4G34990.1     LLGNKWSLIATRLPGRTDNEIK---------NYWNTHVKRKLL----------------R
Sb031046_Sorbi1 -------LVFLLLARRADAEIEVEVGAPGHLNDGRRHRLDRLMLWRLRCDGGVGFVGLER
gm032581_Glyma1 LLGNKWSLIAGRLPGRTDNEIK---------NYWNTHIRRKLL----------------N
                       *:   *. *:* **:         *  . *   :*:                .

AT4G34990.1     KGIDPATHRPINETKTSQDSSDSSKTEDPLVKILSFGPQLEKIANFGDERIQKRVEYSVV
Sb031046_Sorbi1 DGGDGAG------------------------------------AGVGDGAVRDGVD-APA
gm032581_Glyma1 RGIDPATHRPLNEAASAATVTTATTN-------ISFGKQQEQETSSSNGSVVK----GSI
                 * * *                                     :. .:  : .    .  

AT4G34990.1     EERCLDLN----LELRISPPWQDKLHDERNLRFGRVKYRCSACRFGFGNGKECSCNNVKC
Sb031046_Sorbi1 KQLPPDVRVPVVLDLVVRPPREPR-GDERPL--------VAEEAVQLDDEVVLVGGEVAA
gm032581_Glyma1 LERCPDLN----LELTISPPRQQQ--PQKNL--------CFVCSLGLNNSKDCSCNVANT
                 :   *:.    *:* : ** : :   :: *             . :.:      . .  

AT4G34990.1     QTEDSSSSSYSSTDISSSI-----------------------------------------
Sb031046_Sorbi1 LEVGAEVVDPAEAAALAAAHQSGRLGQRPPAPFAVRADVRHQAVVLLLGPRALVRVRLLA
gm032581_Glyma1 VTVTVSNTTPSSAAAAAAA-----------------------------------------
                     .    :.:   ::                                          

AT4G34990.1     ------------------GYDF-------------------LGLNNTRVLDFSTLEMK
Sb031046_Sorbi1 ARRPPHRPASCLAFRFRFGYRFAVWSGGRRLRRAGRGASSAIGLEN------------
gm032581_Glyma1 ------------------AYDF-------------------LGMKTNGVWDCTRLEMK
                                  .* *                   :*::.
BoxShade v3.31 C (beta, 970507) Output
AT4G34990.1     - M G R S P C C E K D H T N K G A W T K E E D D K L I S Y I K A H G E G C W R S L P R S A G L Q R C G K S C R L R W - -
Sb031046_Sorbi1    L P Y P N P T S Q E P N Q - - - - - T K E K N S A A G H F D R S Y G H G - - - - - - - - - - - - R L I H S L H L E A S E
gm032581_Glyma1    - M G R S P C C E K A H T N K G A W T K E E D D R L I S Y I R A H G E G C W R S L P K A A G L L R C G K S C R L R W - -
 
AT4G34990.1     I N Y L R P D L K R - - - - - - - - - - - - - G N F T L E E - - - - - - - - - - - - - - - - - - - D D - - L I I K L H S
Sb031046_Sorbi1    V E H A G P E P Q E A V V A V A A A A A A P G G S F L D A Q A A A E A E A A A M A G L Q H L P L D D D G G L E V Q L - -
gm032581_Glyma1    I N Y L R P D L K R - - - - - - - - - - - - - G N F T E E E - - - - - - - - - - - - - - - - - - - D E - - L I I K L H S
 
AT4G34990.1     L L G N K W S L I A T R L P G R T D N E I K - - - - - - - - - N Y W N T H V K R K L L - - - - - - - - - - - - - - - - R
Sb031046_Sorbi1    - - - - - - - L V F L L L A R R A D A E I E V E V G A P G H L N D G R R H R L D R L M L W R L R C D G G V G F V G L E R
gm032581_Glyma1    L L G N K W S L I A G R L P G R T D N E I K - - - - - - - - - N Y W N T H I R R K L L - - - - - - - - - - - - - - - - N
 
AT4G34990.1     K G I D P A T H R P I N E T K T S Q D S S D S S K T E D P L V K I L S F G P Q L E K I A N F G D E R I Q K R V E Y S V V
Sb031046_Sorbi1    D G G D G A G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A G V G D G A V R D G V D - A P A
gm032581_Glyma1    R G I D P A T H R P L N E A A S A A T V T T A T T N - - - - - - - I S F G K Q Q E Q E T S S S N G S V V K - - - - G S I
 
AT4G34990.1     E E R C L D L N - - - - L E L R I S P P W Q D K L H D E R N L R F G R V K Y R C S A C R F G F G N G K E C S C N N V K C
Sb031046_Sorbi1    K Q L P P D V R V P V V L D L V V R P P R E P R - G D E R P L - - - - - - - - V A E E A V Q L D D E V V L V G G E V A A
gm032581_Glyma1    L E R C P D L N - - - - L E L T I S P P R Q Q Q - - P Q K N L - - - - - - - - C F V C S L G L N N S K D C S C N V A N T
 
AT4G34990.1     Q T E D S S S S S Y S S T D I S S S I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb031046_Sorbi1    L E V G A E V V D P A E A A A L A A A H Q S G R L G Q R P P A P F A V R A D V R H Q A V V L L L G P R A L V R V R L L A
gm032581_Glyma1    V T V T V S N T T P S S A A A A A A A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G34990.1     - - - - - - - - - - - - - - - - - - G Y D F - - - - - - - - - - - - - - - - - - - L G L N N T R V L D F S T L E M K
Sb031046_Sorbi1    A R R P P H R P A S C L A F R F R F G Y R F A V W S G G R R L R R A G R G A S S A I G L E N - - - - - - - - - - - -
gm032581_Glyma1    - - - - - - - - - - - - - - - - - - A Y D F - - - - - - - - - - - - - - - - - - - L G M K T N G V W D C T R L E M K
 
0