fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34990.1 VVEERCLDLNLELRIS at 181/274 in AT4G34990.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018632 QERCPDLNLELRISLP in 186/268 AT4G38620.1 1st_not 0.598039215 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G34990.1     MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY
pt018632_POPTR_ MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRTHGEGCWRSLPKAAGLLRCGKSCRLRWINY
                ********* *************:**:**::**********::*** *************

AT4G34990.1     LRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKG
pt018632_POPTR_ LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRG
                *********** ***:***************** *****************::****.:*

AT4G34990.1     IDPATHRPINE--------------TKTSQDSSDSSKTEDPLVKILSFGPQLEKIANFGD
pt018632_POPTR_ IDPATHRPLNEPAQEASTTISFSTTTSVKEESLSSVKEESNKEKIISAAAFICK------
                ********:**              *...::* .* * *.   **:* .. : *      

AT4G34990.1     ERIQKRVEYSVVEERCLDLNLELRISPPWQDKLHDERNLRFGRVKYRCSACRFGFGNGKE
pt018632_POPTR_ ------EEKTPVQERCPDLNLELRISLPCQNQPDRHQAFKTGGSTSLCFACSLGLQNSKD
                       * : *:*** ********* * *:: . .: :: *  .  * ** :*: *.*:

AT4G34990.1     CSCNNVKCQTEDSSSSSYSSTDISSSIGYDFLGLNNTRVLDFSTLEMK
pt018632_POPTR_ CSC-SVIVGTIGSSSSAGSKT------GYDFLGM-KSGVLDYRGLEMK
                *** .*   * .****: *.*      ******: :: ***:  ****
BoxShade v3.31 C (beta, 970507) Output
AT4G34990.1     M G R S P C C E K D H T N K G A W T K E E D D K L I S Y I K A H G E G C W R S L P R S A G L Q R C G K S C R L R W I N Y
pt018632_POPTR_    M G R S P C C E K A H T N K G A W T K E E D D R L I A Y I R T H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
 
AT4G34990.1     L R P D L K R G N F T L E E D D L I I K L H S L L G N K W S L I A T R L P G R T D N E I K N Y W N T H V K R K L L R K G
pt018632_POPTR_    L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L L N R G
 
AT4G34990.1     I D P A T H R P I N E - - - - - - - - - - - - - - T K T S Q D S S D S S K T E D P L V K I L S F G P Q L E K I A N F G D
pt018632_POPTR_    I D P A T H R P L N E P A Q E A S T T I S F S T T T S V K E E S L S S V K E E S N K E K I I S A A A F I C K - - - - - -
 
AT4G34990.1     E R I Q K R V E Y S V V E E R C L D L N L E L R I S P P W Q D K L H D E R N L R F G R V K Y R C S A C R F G F G N G K E
pt018632_POPTR_    - - - - - - E E K T P V Q E R C P D L N L E L R I S L P C Q N Q P D R H Q A F K T G G S T S L C F A C S L G L Q N S K D
 
AT4G34990.1     C S C N N V K C Q T E D S S S S S Y S S T D I S S S I G Y D F L G L N N T R V L D F S T L E M K
pt018632_POPTR_    C S C - S V I V G T I G S S S S A G S K T - - - - - - G Y D F L G M - K S G V L D Y R G L E M K
 
0