fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34990.1 VVEERCLDLNLELRIS at 181/274 in AT4G34990.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os032444 PPKCPDLNLDLCISPP in 161/243 AT4G38620.1 1st_not 0.535294117 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G34990.1     MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY
Os032444_Os08t0 MGRSPCCEKEHTNKGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
                *********:************::*::**:***********::*** *************

AT4G34990.1     LRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKG
Os032444_Os08t0 LRPDLKRGNFTADEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIRRKLLGRG
                *********** :********************:*****************::**** :*

AT4G34990.1     IDPATHRPINETKTSQDSSDSSKTEDPLVKILSFGPQLEKIANFGDERIQKRVEYSVVEE
Os032444_Os08t0 IDPVTHRPVNAAAAT----------------ISFHPQPPPTT---------KEEQLILSK
                ***.****:* : ::                :** **    :         : *  ::.:

AT4G34990.1     --RCLDLNLELRISPPWQDKLHDERN------LRFGRVKYR----CSACRFGFGNGKECS
Os032444_Os08t0 PPKCPDLNLDLCISPPSCQEEDDDYEAKPAMIVRAPELQRRRGGLCFGCSLGL--QKECK
                  :* ****:* ****  :: .*: :      :*  .:: *    * .* :*:   ***.

AT4G34990.1     CNNVKCQTEDSSSSSYSSTDISSSIGYDFLGLNNTRVLDFSTLEMK
Os032444_Os08t0 C---------------SGGGAGAGAGNNFLGL-RAGMLDFRSLPMK
                *               *. . .:. * :**** .: :*** :* **
BoxShade v3.31 C (beta, 970507) Output
AT4G34990.1     M G R S P C C E K D H T N K G A W T K E E D D K L I S Y I K A H G E G C W R S L P R S A G L Q R C G K S C R L R W I N Y
Os032444_Os08t0    M G R S P C C E K E H T N K G A W T K E E D E R L V A Y I R A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
 
AT4G34990.1     L R P D L K R G N F T L E E D D L I I K L H S L L G N K W S L I A T R L P G R T D N E I K N Y W N T H V K R K L L R K G
Os032444_Os08t0    L R P D L K R G N F T A D E D D L I I K L H S L L G N K W S L I A A R L P G R T D N E I K N Y W N T H I R R K L L G R G
 
AT4G34990.1     I D P A T H R P I N E T K T S Q D S S D S S K T E D P L V K I L S F G P Q L E K I A N F G D E R I Q K R V E Y S V V E E
Os032444_Os08t0    I D P V T H R P V N A A A A T - - - - - - - - - - - - - - - - I S F H P Q P P P T T - - - - - - - - - K E E Q L I L S K
 
AT4G34990.1     - - R C L D L N L E L R I S P P W Q D K L H D E R N - - - - - - L R F G R V K Y R - - - - C S A C R F G F G N G K E C S
Os032444_Os08t0    P P K C P D L N L D L C I S P P S C Q E E D D D Y E A K P A M I V R A P E L Q R R R G G L C F G C S L G L - - Q K E C K
 
AT4G34990.1     C N N V K C Q T E D S S S S S Y S S T D I S S S I G Y D F L G L N N T R V L D F S T L E M K
Os032444_Os08t0    C - - - - - - - - - - - - - - - S G G G A G A G A G N N F L G L - R A G M L D F R S L P M K
 
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