fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34990.1 VVEERCLDLNLELRIS at 181/274 in AT4G34990.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031046 VPRCPDLNLDLCISPP in 216/452 AT4G34990.1 1st_1st 0.560784313 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G34990.1     MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY
Sb031046_Sorbi1 -LPYPNPTSQEPNQ---TKEKNSAAGHFDRSYGHG---RLIHSLHLEASE-------VEH
                    *   .:..*:   ***::.    : :::*.*    * :*  *: .        :::

AT4G34990.1     LRPDLKR-------------GNF--------------------TLEED-DLIIKLHSLLG
Sb031046_Sorbi1 AGPEPQEAVVAVAAAAAAPGGSFLDAQAAAEAEAAAMAGLQHLPLDDDGGLEVQL-----
                  *: :.             *.*                    .*::* .* ::*     

AT4G34990.1     NKWSLIATRLPGRTDNEIK------NYWNTHVKRKL------------------------
Sb031046_Sorbi1 ----LVFLLLARRADAEIEVEVGAPGHLNDGRRHRLDRLMLWRLRCDGGVGFVGLERDGG
                    *:   *. *:* **:      .: *   :::*                        

AT4G34990.1     -----------LRKGID-PATHRPINETKTSQDSSDSSKTEDPLVKILSFGPQLEKIANF
Sb031046_Sorbi1 DGAGAGVGDGAVRDGVDAPAKQLPPD-------------VRVPVVLDLVVRPPREP---R
                           :*.*:* **.: * :             .. *:*  * . *  *     

AT4G34990.1     GDERIQKRVEYSVVEERCLDLNLELRI---------------------------------
Sb031046_Sorbi1 GDER-------PLVAEEAVQLDDEVVLVGGEVAALEVGAEVVDPAEAAALAAAHQSGRLG
                ****       .:* *..::*: *: :                                 

AT4G34990.1     -SPPW-----QDKLHDERNLRFG-------------RVKYRCSAC---RFGFGNGKECSC
Sb031046_Sorbi1 QRPPAPFAVRADVRHQAVVLLLGPRALVRVRLLAARRPPHRPASCLAFRFRFGYRFAVWS
                  **       *  *:   * :*             *  :* ::*   ** **      .

AT4G34990.1     NNVKCQTEDSSSSSYSSTDISSSIGYDFLGLNNTRVLDFSTLEMK
Sb031046_Sorbi1 GGRRLRRAGRGASSA-------------IGLEN------------
                .. : :  . .:**              :**:*
BoxShade v3.31 C (beta, 970507) Output
AT4G34990.1     M G R S P C C E K D H T N K G A W T K E E D D K L I S Y I K A H G E G C W R S L P R S A G L Q R C G K S C R L R W I N Y
Sb031046_Sorbi1    - L P Y P N P T S Q E P N Q - - - T K E K N S A A G H F D R S Y G H G - - - R L I H S L H L E A S E - - - - - - - V E H
 
AT4G34990.1     L R P D L K R - - - - - - - - - - - - - G N F - - - - - - - - - - - - - - - - - - - - T L E E D - D L I I K L H S L L G
Sb031046_Sorbi1    A G P E P Q E A V V A V A A A A A A P G G S F L D A Q A A A E A E A A A M A G L Q H L P L D D D G G L E V Q L - - - - -
 
AT4G34990.1     N K W S L I A T R L P G R T D N E I K - - - - - - N Y W N T H V K R K L - - - - - - - - - - - - - - - - - - - - - - - -
Sb031046_Sorbi1    - - - - L V F L L L A R R A D A E I E V E V G A P G H L N D G R R H R L D R L M L W R L R C D G G V G F V G L E R D G G
 
AT4G34990.1     - - - - - - - - - - - L R K G I D - P A T H R P I N E T K T S Q D S S D S S K T E D P L V K I L S F G P Q L E K I A N F
Sb031046_Sorbi1    D G A G A G V G D G A V R D G V D A P A K Q L P P D - - - - - - - - - - - - - V R V P V V L D L V V R P P R E P - - - R
 
AT4G34990.1     G D E R I Q K R V E Y S V V E E R C L D L N L E L R I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb031046_Sorbi1    G D E R - - - - - - - P L V A E E A V Q L D D E V V L V G G E V A A L E V G A E V V D P A E A A A L A A A H Q S G R L G
 
AT4G34990.1     - S P P W - - - - - Q D K L H D E R N L R F G - - - - - - - - - - - - - R V K Y R C S A C - - - R F G F G N G K E C S C
Sb031046_Sorbi1    Q R P P A P F A V R A D V R H Q A V V L L L G P R A L V R V R L L A A R R P P H R P A S C L A F R F R F G Y R F A V W S
 
AT4G34990.1     N N V K C Q T E D S S S S S Y S S T D I S S S I G Y D F L G L N N T R V L D F S T L E M K
Sb031046_Sorbi1    G G R R L R R A G R G A S S A - - - - - - - - - - - - - I G L E N - - - - - - - - - - - -
 
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