fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G34990.1 VVEERCLDLNLELRIS at 181/274 in AT4G34990.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm032581 LERCPDLNLELTISPP in 173/253 AT4G34990.1 1st_1st 0.621568627 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G34990.1     MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY
gm032581_Glyma1 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
                ********* *************:*****:***********::*** *************

AT4G34990.1     LRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKLLRKG
gm032581_Glyma1 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRG
                *********** ***:***************** *****************::****.:*

AT4G34990.1     IDPATHRPINETKTSQDSSDSSKTEDPLVKILSFGPQLEKIANFGDERIQKRVEYSVVEE
gm032581_Glyma1 IDPATHRPLNEAASAATVTTATTN-------ISFGKQQEQETSSSNGSVVK----GSILE
                ********:**: ::   : ::..       :*** * *: :. .:  : *    . : *

AT4G34990.1     RCLDLNLELRISPPWQDKLHDERNLRFGRVKYRCSACRFGFGNGKECSCNNVKCQTEDSS
gm032581_Glyma1 RCPDLNLELTISPPRQQQ--PQKNL--------CFVCSLGLNNSKDCSCNVANTVTVTVS
                ** ****** **** *::   ::**        * .* :*:.*.*:**** .:  *   *

AT4G34990.1     SSSYSSTDISSSIGYDFLGLNNTRVLDFSTLEMK
gm032581_Glyma1 NTTPSSAAAAAAAAYDFLGMKTNGVWDCTRLEMK
                .:: **:  ::: .*****::.. * * : ****
BoxShade v3.31 C (beta, 970507) Output
AT4G34990.1     M G R S P C C E K D H T N K G A W T K E E D D K L I S Y I K A H G E G C W R S L P R S A G L Q R C G K S C R L R W I N Y
gm032581_Glyma1    M G R S P C C E K A H T N K G A W T K E E D D R L I S Y I R A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
 
AT4G34990.1     L R P D L K R G N F T L E E D D L I I K L H S L L G N K W S L I A T R L P G R T D N E I K N Y W N T H V K R K L L R K G
gm032581_Glyma1    L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L L N R G
 
AT4G34990.1     I D P A T H R P I N E T K T S Q D S S D S S K T E D P L V K I L S F G P Q L E K I A N F G D E R I Q K R V E Y S V V E E
gm032581_Glyma1    I D P A T H R P L N E A A S A A T V T T A T T N - - - - - - - I S F G K Q Q E Q E T S S S N G S V V K - - - - G S I L E
 
AT4G34990.1     R C L D L N L E L R I S P P W Q D K L H D E R N L R F G R V K Y R C S A C R F G F G N G K E C S C N N V K C Q T E D S S
gm032581_Glyma1    R C P D L N L E L T I S P P R Q Q Q - - P Q K N L - - - - - - - - C F V C S L G L N N S K D C S C N V A N T V T V T V S
 
AT4G34990.1     S S S Y S S T D I S S S I G Y D F L G L N N T R V L D F S T L E M K
gm032581_Glyma1    N T T P S S A A A A A A A A Y D F L G M K T N G V W D C T R L E M K
 
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