fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G35040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018669 not found in 265aa AT4G35040.1 not_1st 0.595387840 II
Pt018668 not found in 266aa AT4G35040.1 not_1st 0.595387840 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G35040.1     MEDGELDFSNQEVFSSSEMGELPPSNCSMDSFFDGLLMDTNAACTHTHTCNPTGPENTHT
pt018669_POPTR_ MDDGELDFSNQDLLSSPNIGEI-PSSCSFD-FLDELLKDTH-ACTHTHTCNPPGPDYSHT
pt018668_POPTR_ MDDGELDFSNQDLLSSPNIGEI-PSSCSFD-FLDELLKDTH-ACTHTHTCNPPGPDYSHT
                *:*********:::**.::**: **.**:* *:* ** **: **********.**: :**

AT4G35040.1     HTCFHVHTKILPDESDEKVSTDDTAESCGKKGEKRPLGNREAVRKYREKKKAKAASLEDE
pt018669_POPTR_ HTCYHVHTKILPPAED-KVVSDDTAESTDKKSKKRSSGNREAVRKYRERKKAKAASLEDE
pt018668_POPTR_ HTCYHVHTKILPPAED-KVVSDDTAESTDKKSKKRSSGNREAVRKYRERKKAKAASLEDE
                ***:********  .* ** :****** .**.:**. ***********:***********

AT4G35040.1     VARLRAVNQQLVKRLQNQATLEAEVSRLKCLLVDLRGRIDGEIGSFPYQKP------MAA
pt018669_POPTR_ VKHLRALNQQLLKRLQGQAALEAEVARLKCLLVDIRGRIEGEIGSFPYQKSANNVNLANP
pt018668_POPTR_ VKHLRALNQQLLKRLQGQAALEAEVARLKCLLVDIRGRIEGEIGSFPYQKSANNVNLANP
                * :***:****:****.**:*****:********:****:**********.        .

AT4G35040.1     NIPSFSHMMNPCNVQCDDEVYCPQNVFGVNSQEGASINDQGLSGCDFDQLQCMANQN---
pt018669_POPTR_ NIPG-SLVMNPCNIQCDGQIYCQRPVLDSKGGEGAPLNGQGFSSCEIENLQCMEYQNSGM
pt018668_POPTR_ NIPG-SLVMNPCNIQCDGQIYCQRPVLDSKGGEGAPLNGQGFSSCEIENLQCMEYQNSGM
                ***. * :*****:***.::** : *:. :. ***.:*.**:*.*::::****  **   

AT4G35040.1     --LNGNGNGS-FSNVNTSVSNKR-KGGHRASRAV
pt018669_POPTR_ IGLSGCSLGNEATNGNSSSTNKR-KGIVEQV---
pt018668_POPTR_ IGLSGCSLGNEATNGNSSSTNKRKKGIVEQV---
                  *.* . *.  :* *:* :*** **  .
BoxShade v3.31 C (beta, 970507) Output
AT4G35040.1     M E D G E L D F S N Q E V F S S S E M G E L P P S N C S M D S F F D G L L M D T N A A C T H T H T C N P T G P E N T H T
pt018669_POPTR_    M D D G E L D F S N Q D L L S S P N I G E I - P S S C S F D - F L D E L L K D T H - A C T H T H T C N P P G P D Y S H T
pt018668_POPTR_    M D D G E L D F S N Q D L L S S P N I G E I - P S S C S F D - F L D E L L K D T H - A C T H T H T C N P P G P D Y S H T
 
AT4G35040.1     H T C F H V H T K I L P D E S D E K V S T D D T A E S C G K K G E K R P L G N R E A V R K Y R E K K K A K A A S L E D E
pt018669_POPTR_    H T C Y H V H T K I L P P A E D - K V V S D D T A E S T D K K S K K R S S G N R E A V R K Y R E R K K A K A A S L E D E
pt018668_POPTR_    H T C Y H V H T K I L P P A E D - K V V S D D T A E S T D K K S K K R S S G N R E A V R K Y R E R K K A K A A S L E D E
 
AT4G35040.1     V A R L R A V N Q Q L V K R L Q N Q A T L E A E V S R L K C L L V D L R G R I D G E I G S F P Y Q K P - - - - - - M A A
pt018669_POPTR_    V K H L R A L N Q Q L L K R L Q G Q A A L E A E V A R L K C L L V D I R G R I E G E I G S F P Y Q K S A N N V N L A N P
pt018668_POPTR_    V K H L R A L N Q Q L L K R L Q G Q A A L E A E V A R L K C L L V D I R G R I E G E I G S F P Y Q K S A N N V N L A N P
 
AT4G35040.1     N I P S F S H M M N P C N V Q C D D E V Y C P Q N V F G V N S Q E G A S I N D Q G L S G C D F D Q L Q C M A N Q N - - -
pt018669_POPTR_    N I P G - S L V M N P C N I Q C D G Q I Y C Q R P V L D S K G G E G A P L N G Q G F S S C E I E N L Q C M E Y Q N S G M
pt018668_POPTR_    N I P G - S L V M N P C N I Q C D G Q I Y C Q R P V L D S K G G E G A P L N G Q G F S S C E I E N L Q C M E Y Q N S G M
 
AT4G35040.1     - - L N G N G N G S - F S N V N T S V S N K R - K G G H R A S R A V
pt018669_POPTR_    I G L S G C S L G N E A T N G N S S S T N K R - K G I V E Q V - - -
pt018668_POPTR_    I G L S G C S L G N E A T N G N S S S T N K R K K G I V E Q V - - -
 
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