fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G35040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021685 not found in 267aa AT4G35040.1 1st_1st 0.599580712 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G35040.1     MEDGELDFSNQEVFSSSEMGELPPSNCSMDSFFDGLLMDTNAACTHTHTCNPTGPENTHT
pt021685_POPTR_ MDDGELDYSNQELFLSPNMDDL-PSSCSY-GFLDELLMDTPHACTHTHTCNPPGPDNPHT
                *:*****:****:* *.:*.:* **.**  .*:* *****  **********.**:*.**

AT4G35040.1     HTCFHVHTKILPDESDEKVSTDDTAESCGKKGEKRPLGNREAVRKYREKKKAKAASLEDE
pt021685_POPTR_ HVCFHAHTKLL-SSSEDKVESEDTAESIEKKSKKRPLGNREAVRKYREKKKAKAASLEDE
                *.***.***:* ..*::**.::*****  **.:***************************

AT4G35040.1     VARLRAVNQQLVKRLQNQATLEAEVSRLKCLLVDLRGRIDGEIGSFPYQKPM-AANIPSF
pt021685_POPTR_ VKRLRALNQQLLKRLQGQAALEAEVARLKCLLVDIRGRIEGEIGSFPYQKSANNVNLTNF
                * ****:****:****.**:*****:********:****:**********.   .*:..*

AT4G35040.1     --SHMMNPCNVQCDDEVYCPQNVFGVNSQEGASINDQGLSGCDFDQLQCMANQN-----L
pt021685_POPTR_ PGSLVMNPCNIRCDDQVYCQHPGLDGKGGEGEALKGQGFNSCEFENLQCMEYQNSGMRDL
                  * :*****::***:*** :  :. :. ** :::.**:..*:*::****  **     *

AT4G35040.1     NGNGNGSFS-NVNTSVSNKRKGGHRASRAV--
pt021685_POPTR_ PGCSIGNEEMNGNSSSANKRKGG--ACEATVS
                 * . *. . * *:* :******  *..*.
BoxShade v3.31 C (beta, 970507) Output
AT4G35040.1     M E D G E L D F S N Q E V F S S S E M G E L P P S N C S M D S F F D G L L M D T N A A C T H T H T C N P T G P E N T H T
pt021685_POPTR_    M D D G E L D Y S N Q E L F L S P N M D D L - P S S C S Y - G F L D E L L M D T P H A C T H T H T C N P P G P D N P H T
 
AT4G35040.1     H T C F H V H T K I L P D E S D E K V S T D D T A E S C G K K G E K R P L G N R E A V R K Y R E K K K A K A A S L E D E
pt021685_POPTR_    H V C F H A H T K L L - S S S E D K V E S E D T A E S I E K K S K K R P L G N R E A V R K Y R E K K K A K A A S L E D E
 
AT4G35040.1     V A R L R A V N Q Q L V K R L Q N Q A T L E A E V S R L K C L L V D L R G R I D G E I G S F P Y Q K P M - A A N I P S F
pt021685_POPTR_    V K R L R A L N Q Q L L K R L Q G Q A A L E A E V A R L K C L L V D I R G R I E G E I G S F P Y Q K S A N N V N L T N F
 
AT4G35040.1     - - S H M M N P C N V Q C D D E V Y C P Q N V F G V N S Q E G A S I N D Q G L S G C D F D Q L Q C M A N Q N - - - - - L
pt021685_POPTR_    P G S L V M N P C N I R C D D Q V Y C Q H P G L D G K G G E G E A L K G Q G F N S C E F E N L Q C M E Y Q N S G M R D L
 
AT4G35040.1     N G N G N G S F S - N V N T S V S N K R K G G H R A S R A V - -
pt021685_POPTR_    P G C S I G N E E M N G N S S S A N K R K G G - - A C E A T V S
 
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