fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G35040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm032594 not found in 253aa AT2G16770.1 not_not 0.607966457 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G35040.1     MEDGELDFSNQEVFSSSEMGELPPSNCSMDSFFDGLLMDTNAACTHTHTCNPTGPENTHT
gm032594_Glyma1 MDDGELDFSNHEVFSSPNMGELPSSG-SMDSFFDELLKDTH-ACTHTHTCNPPGPDFSHT
                *:********:*****.:*****.*. ******* ** **: **********.**: :**

AT4G35040.1     HTCFHVHTKILPDESDEKVSTDDTAESCGKK---GEKRPLGNREAVRKYREKKKAKAASL
gm032594_Glyma1 HTCYHVHTKIVPAPEEDHVATDDTAESAEKKSSSSKKRSLGNKEAVRKYREKKKARAASL
                ***:******:*  .:::*:*******. **   .:**.***:************:****

AT4G35040.1     EDEVARLRAVNQQLVKRLQNQATLEAEVSRLKCLLVDLRGRIDGEIGSFPYQKPM-----
gm032594_Glyma1 EDEVVKLRALNQHLMKKLKGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKPTPNANP
                ****.:***:**:*:*:*:.**:****::********:****:***********      

AT4G35040.1     -AANIPSFSHMMNPCNVQCDDEVYC--PQNVFGVNSQEGASINDQGLSGCDFDQLQCMAN
gm032594_Glyma1 PVANLPG-SYVMNPCNLQCDDRVYCHHPYGKIG----ESAALNGEEFDGCEFENLQCLAS
                 .**:*. *::*****:****.***  * . :*    *.*::*.: :.**:*::***:*.

AT4G35040.1     QNLN-------GNGNGSFSNVNTSVSNKRKGGHRASRAV
gm032594_Glyma1 QNLGLKDLRACGVGQGDLML-------------------
                ***.       * *:*.:
BoxShade v3.31 C (beta, 970507) Output
AT4G35040.1     M E D G E L D F S N Q E V F S S S E M G E L P P S N C S M D S F F D G L L M D T N A A C T H T H T C N P T G P E N T H T
gm032594_Glyma1    M D D G E L D F S N H E V F S S P N M G E L P S S G - S M D S F F D E L L K D T H - A C T H T H T C N P P G P D F S H T
 
AT4G35040.1     H T C F H V H T K I L P D E S D E K V S T D D T A E S C G K K - - - G E K R P L G N R E A V R K Y R E K K K A K A A S L
gm032594_Glyma1    H T C Y H V H T K I V P A P E E D H V A T D D T A E S A E K K S S S S K K R S L G N K E A V R K Y R E K K K A R A A S L
 
AT4G35040.1     E D E V A R L R A V N Q Q L V K R L Q N Q A T L E A E V S R L K C L L V D L R G R I D G E I G S F P Y Q K P M - - - - -
gm032594_Glyma1    E D E V V K L R A L N Q H L M K K L K G Q A A L E A E I A R L K C L L V D I R G R I E G E I G S F P Y Q K P T P N A N P
 
AT4G35040.1     - A A N I P S F S H M M N P C N V Q C D D E V Y C - - P Q N V F G V N S Q E G A S I N D Q G L S G C D F D Q L Q C M A N
gm032594_Glyma1    P V A N L P G - S Y V M N P C N L Q C D D R V Y C H H P Y G K I G - - - - E S A A L N G E E F D G C E F E N L Q C L A S
 
AT4G35040.1     Q N L N - - - - - - - G N G N G S F S N V N T S V S N K R K G G H R A S R A V
gm032594_Glyma1    Q N L G L K D L R A C G V G Q G D L M L - - - - - - - - - - - - - - - - - - -
 
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