fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G35280.1 MISGALDLNVPPTIQDL at 256/284 in AT4G35280.1
DTSGCCLDLRLGL at 276/284 in AT4G35280.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm005714 FSSPLALDLRLGL in 230/237 AT4G35280.1 1st_1st 0.397810218 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G35280.1     MNNNHSYDDRSFHIPLHPSNTSNPNPNLQFALSSSYDHSPKKKRTKTVASSSS-----SS
gm005714_Glyma0 MKRESDCGE---------------------AGSSSWCVGKKQKQKRLMEDAGGWKGKISS
                *:.: . .:                     * ***:  . *:*:.: : .:..     **

AT4G35280.1     PKSASKPKYTKKPDPNAPKITRPCTECGRKFWSWKALFGHMRCHPERQWRGINPPPNYRV
gm005714_Glyma0 SSSSSEP--------------RPCTECGKKFWSWKALFGHMRCHPERHWRGINPPPN---
                ..*:*:*              *******:******************:*********   

AT4G35280.1     PTAASSKQLNQILPNWVSFMSEEDHEVASCLLMLSNGTPSSSSIER---FECGGCKKVFG
gm005714_Glyma0 -VIRRQQQ-----------MTQEDHEVAACLLLLANAKDKDKDKEEDVHFECSSCNKVFG
                 .   .:*           *::******:***:*:*.. .... *.   ***..*:****

AT4G35280.1     SHQALGGHRASHKNVKGCFAITNVTDDPMTVSTSSGHDHQGKILTFSGHHKCNICFRVFS
gm005714_Glyma0 SHQALGGHRASHKNVKGCFA------NNAAIGTSSSTSDQENMMILHG-HKCSICLRVFS
                ********************      :  ::.***. ..* ::: : * ***.**:****

AT4G35280.1     SGQALGGHMRCHWEK--------EEEPMISGALDLNVPPTIQDLSTSDTSGCCLDLRLGL
gm005714_Glyma0 TGQALGGHKRCHWDKGDNLGLLADSSSKSLSLVDLNFPP------PSFSSPLALDLRLGL
                :******* ****:*        :...   . :***.**      .* :*  .*******
BoxShade v3.31 C (beta, 970507) Output
AT4G35280.1     M N N N H S Y D D R S F H I P L H P S N T S N P N P N L Q F A L S S S Y D H S P K K K R T K T V A S S S S - - - - - S S
gm005714_Glyma0    M K R E S D C G E - - - - - - - - - - - - - - - - - - - - - A G S S S W C V G K K Q K Q K R L M E D A G G W K G K I S S
 
AT4G35280.1     P K S A S K P K Y T K K P D P N A P K I T R P C T E C G R K F W S W K A L F G H M R C H P E R Q W R G I N P P P N Y R V
gm005714_Glyma0    S S S S S E P - - - - - - - - - - - - - - R P C T E C G K K F W S W K A L F G H M R C H P E R H W R G I N P P P N - - -
 
AT4G35280.1     P T A A S S K Q L N Q I L P N W V S F M S E E D H E V A S C L L M L S N G T P S S S S I E R - - - F E C G G C K K V F G
gm005714_Glyma0    - V I R R Q Q Q - - - - - - - - - - - M T Q E D H E V A A C L L L L A N A K D K D K D K E E D V H F E C S S C N K V F G
 
AT4G35280.1     S H Q A L G G H R A S H K N V K G C F A I T N V T D D P M T V S T S S G H D H Q G K I L T F S G H H K C N I C F R V F S
gm005714_Glyma0    S H Q A L G G H R A S H K N V K G C F A - - - - - - N N A A I G T S S S T S D Q E N M M I L H G - H K C S I C L R V F S
 
AT4G35280.1     S G Q A L G G H M R C H W E K - - - - - - - - E E E P M I S G A L D L N V P P T I Q D L S T S D T S G C C L D L R L G L
gm005714_Glyma0    T G Q A L G G H K R C H W D K G D N L G L L A D S S S K S L S L V D L N F P P - - - - - - P S F S S P L A L D L R L G L
 
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