fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G35390.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039215 not found in 302aa AT4G35390.1 1st_1st 0.470588235 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G35390.1     MSSYM--------------HPLLGQELHL-QRPEDSRTPPDQNNMELNRSEADEAKAETT
pt039215_POPTR_ MAGYESTSTGNNSRYLHHNHNLLRPELHLIQRPS---TIPSSDSKENNTPSPDHAKP--I
                *:.*               * **  **** ***.   * *..:. * * ...*.**.   

AT4G35390.1     PTGGATSSATASGSSSG-------RRPRGRPAGSKNKPKPPTIITRDSPNVLRSHVLEVT
pt039215_POPTR_ ATSDHHPDRTTSGTSSGGGGTNPSSRPRGRPAGSKNKPKPPIIVTRDSPNALRSHVLEVS
                .*..  .. *:**:***        **************** *:******.********:

AT4G35390.1     SGSDISEAVSTYATRRGCGVCIISGTGAVTNVTIRQPAAPAGGGVITLHGRFDILSLTGT
pt039215_POPTR_ SGADIVESVSNYARKRGIGVCVLSGSGSVANVTLRQPASPA-GSVLTLHGRFEILSLSGT
                **:** *:**.** :** ***::**:*:*:***:****:** *.*:******:****:**

AT4G35390.1     ALPPPAPPGAGGLTVYLAGGQGQVVGGNVAGSLIASGPVVLMAASFANAVYDRLPIEEEE
pt039215_POPTR_ VLPPPAPPGAGGLSIFLSGGQGQVVGGNVVGLLMAAGPVVLMAASFANAVFERLPLDDQE
                .************:::*:***********.* *:*:**************::***::::*

AT4G35390.1     TPPPRTTGVQQQQPEASQSSEVTGSGAQACESNLQGGNGGGGVAFYNL-GMNMNNFQFSG
pt039215_POPTR_ -----EAGAVQVQPTASQNSGVTGSGGQMGDGG--GGSSTGGGGFFPMGGAHHGTYPFS-
                      :*. * ** ***.* *****.*  :..  **.. ** .*: : * : ..: ** 

AT4G35390.1     GDIYGMSGGSGGGGGGATRPAF
pt039215_POPTR_ ADLF------GSWGGNASRPPF
                .*::      *. **.*:**.*
BoxShade v3.31 C (beta, 970507) Output
AT4G35390.1     M S S Y M - - - - - - - - - - - - - - H P L L G Q E L H L - Q R P E D S R T P P D Q N N M E L N R S E A D E A K A E T T
pt039215_POPTR_    M A G Y E S T S T G N N S R Y L H H N H N L L R P E L H L I Q R P S - - - T I P S S D S K E N N T P S P D H A K P - - I
 
AT4G35390.1     P T G G A T S S A T A S G S S S G - - - - - - - R R P R G R P A G S K N K P K P P T I I T R D S P N V L R S H V L E V T
pt039215_POPTR_    A T S D H H P D R T T S G T S S G G G G T N P S S R P R G R P A G S K N K P K P P I I V T R D S P N A L R S H V L E V S
 
AT4G35390.1     S G S D I S E A V S T Y A T R R G C G V C I I S G T G A V T N V T I R Q P A A P A G G G V I T L H G R F D I L S L T G T
pt039215_POPTR_    S G A D I V E S V S N Y A R K R G I G V C V L S G S G S V A N V T L R Q P A S P A - G S V L T L H G R F E I L S L S G T
 
AT4G35390.1     A L P P P A P P G A G G L T V Y L A G G Q G Q V V G G N V A G S L I A S G P V V L M A A S F A N A V Y D R L P I E E E E
pt039215_POPTR_    V L P P P A P P G A G G L S I F L S G G Q G Q V V G G N V V G L L M A A G P V V L M A A S F A N A V F E R L P L D D Q E
 
AT4G35390.1     T P P P R T T G V Q Q Q Q P E A S Q S S E V T G S G A Q A C E S N L Q G G N G G G G V A F Y N L - G M N M N N F Q F S G
pt039215_POPTR_    - - - - - E A G A V Q V Q P T A S Q N S G V T G S G G Q M G D G G - - G G S S T G G G G F F P M G G A H H G T Y P F S -
 
AT4G35390.1     G D I Y G M S G G S G G G G G G A T R P A F
pt039215_POPTR_    A D L F - - - - - - G S W G G N A S R P P F
 
0