fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G35390.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027062 not found in 595aa AT2G45430.1 not_not 0.411764705 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G35390.1     ------MSSYMHPLLGQELHLQRPED--SRTPPDQNNMELNRSEADE-AKAETTPTGGAT
Sb027062_Sorbi1 DNLLINMRNHMQFRRKFDLHDTNSSKRWKKRAKSLNHLSCVCVRADQLLERRRTATGGAR
                      * .:*:     :**  ....  .: . . *::.    .**:  : . *.**** 

AT4G35390.1     SSA-------------------------TASGSS--------------------------
Sb027062_Sorbi1 VPSVGCFWRQLHVAEQVRRQSLEEAWIHSAGGGELRRLLRTRENSCTVGLCLCSEHVILL
                 .:                         :*.*..                          

AT4G35390.1     -------------------SGRRPRGRPAGSKNKPKPPTIITRDSPNVLRSHVLE--VTS
Sb027062_Sorbi1 QRQPLVHGVGERRCHYHHRPSRRERADDAAAHHLPLPAGKVDGEARGFGRRGRREERAGE
                                   ..** *.  *.::: * *.  :  :: .. *    *  . .

AT4G35390.1     GSDISEAVSTYATRRGCGVC---IISGTGAVTNVTIRQPAAPAG-------GGVIT---L
Sb027062_Sorbi1 GEDLEAAVESDDGALGGRLPQGDVGDGAGAAEDA---DPALPAARERRDALGDVAAPGHL
                *.*:. **.:     *  :    : .*:**. :.   :** **.       *.* :   *

AT4G35390.1     H---------------GRFDILSLTGTALPPP-APPGAGGLTVYLA----GGQGQVVGGN
Sb027062_Sorbi1 HDVRPERVGAVPGDDDGRLRL--VLGPRRPAPRAARGAVSSAVWPAATRRGNQRQLVAST
                *               **: :  : *.  *.* *. ** . :*: *    *.* *:*...

AT4G35390.1     VAGSLIASGPVVLMAASFANAVYDRLPIEE-EETPPPRTTGVQQQQPEASQSSEVTGSGA
Sb027062_Sorbi1 AA----AATPVAVSAVLVIMLVVVALDVAAGAEHPWPAATMV------------VLGLEL
                .*    *: **.: *. .   *   * :    * * * :* *            * *   

AT4G35390.1     QACESNLQGGNGGGGVAFYNLGMNMNNFQFSGGD-------IYG-------MSGGSGGGG
Sb027062_Sorbi1 QLVMLLL----------LLLLEMVM---EVAGVEWWRKMVTVYGCCDRIHPLTGRIAN--
                *     *          :  * * *   :.:* :       :**       ::*  ..  

AT4G35390.1     GGATRPAF
Sb027062_Sorbi1 --------
BoxShade v3.31 C (beta, 970507) Output
AT4G35390.1     - - - - - - M S S Y M H P L L G Q E L H L Q R P E D - - S R T P P D Q N N M E L N R S E A D E - A K A E T T P T G G A T
Sb027062_Sorbi1    D N L L I N M R N H M Q F R R K F D L H D T N S S K R W K K R A K S L N H L S C V C V R A D Q L L E R R R T A T G G A R
 
AT4G35390.1     S S A - - - - - - - - - - - - - - - - - - - - - - - - - T A S G S S - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb027062_Sorbi1    V P S V G C F W R Q L H V A E Q V R R Q S L E E A W I H S A G G G E L R R L L R T R E N S C T V G L C L C S E H V I L L
 
AT4G35390.1     - - - - - - - - - - - - - - - - - - - S G R R P R G R P A G S K N K P K P P T I I T R D S P N V L R S H V L E - - V T S
Sb027062_Sorbi1    Q R Q P L V H G V G E R R C H Y H H R P S R R E R A D D A A A H H L P L P A G K V D G E A R G F G R R G R R E E R A G E
 
AT4G35390.1     G S D I S E A V S T Y A T R R G C G V C - - - I I S G T G A V T N V T I R Q P A A P A G - - - - - - - G G V I T - - - L
Sb027062_Sorbi1    G E D L E A A V E S D D G A L G G R L P Q G D V G D G A G A A E D A - - - D P A L P A A R E R R D A L G D V A A P G H L
 
AT4G35390.1     H - - - - - - - - - - - - - - - G R F D I L S L T G T A L P P P - A P P G A G G L T V Y L A - - - - G G Q G Q V V G G N
Sb027062_Sorbi1    H D V R P E R V G A V P G D D D G R L R L - - V L G P R R P A P R A A R G A V S S A V W P A A T R R G N Q R Q L V A S T
 
AT4G35390.1     V A G S L I A S G P V V L M A A S F A N A V Y D R L P I E E - E E T P P P R T T G V Q Q Q Q P E A S Q S S E V T G S G A
Sb027062_Sorbi1    A A - - - - A A T P V A V S A V L V I M L V V V A L D V A A G A E H P W P A A T M V - - - - - - - - - - - - V L G L E L
 
AT4G35390.1     Q A C E S N L Q G G N G G G G V A F Y N L G M N M N N F Q F S G G D - - - - - - - I Y G - - - - - - - M S G G S G G G G
Sb027062_Sorbi1    Q L V M L L L - - - - - - - - - - L L L L E M V M - - - E V A G V E W W R K M V T V Y G C C D R I H P L T G R I A N - -
 
AT4G35390.1     G G A T R P A F
Sb027062_Sorbi1    - - - - - - - -
 
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