fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G35390.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031763 not found in 289aa AT3G55560.1 1st_not 0.435294117 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G35390.1     -----MSSYMHPLLGQELHLQRPEDSRTPPDQNNMELNRSEADEAKAETTPTGGATSSAT
gm031763_Glyma1 MANRWWTGNVGMIREQELM----ENS----NNNN------------ATTTPTNSSNSNTN
                      :. :  :  ***     *:*    ::**            * ****..:.*.:.

AT4G35390.1     AS-------------------------GS---SSGRRPRGRPAGSKNKPKPPTIITRDSP
gm031763_Glyma1 ANTNTTEEEVSRDNGEDLQNQNLGSHEGSEPGSSGRRPRGRPPGSKNKPKPPIVITKESP
                *.                         **   **********.********* :**::**

AT4G35390.1     NVLRSHVLEVTSGSDISEAVSTYATRRGCGVCIISGTGAVTNVTIRQPAAPAGGGVITLH
gm031763_Glyma1 NALRSHVLEITSGSDVAESIAAFANRRHRGVSVLSGSGIVANVTLRQPAAPA--GVITLH
                *.*******:*****::*:::::*.**  **.::**:* *:***:*******  ******

AT4G35390.1     GRFDILSLTGTALPPPAPPGAGGLTVYLAGGQGQVVGGNVAGSLIASGPVVLMAASFANA
gm031763_Glyma1 GRFEILSLSGAFLPSPSPPGATGLTVYLAGGQGQVVGGTVAGSLVASGPVMVIAATFANA
                ***:****:*: **.*:**** ****************.*****:*****:::**:****

AT4G35390.1     VYDRLPIEEEETPPPRTTGVQ-QQQPEASQSSEVTGSGAQACESNLQGGNGGGGVAFYNL
gm031763_Glyma1 TYERLPLEDEQG----EEGMQVQQQQQQQQQQQSQGLGEQV------------SMPMYNL
                .*:***:*:*:       *:* *** : .*..:  * * *.            .:.:***

AT4G35390.1     GMN-MNNFQFSGGDIYGMSGGSGGGGGGATR--PAF
gm031763_Glyma1 PPNLLHNGQNMPHDVL---------WGAPPRPPPSF
                  * ::* *    *:           *...*  *:*
BoxShade v3.31 C (beta, 970507) Output
AT4G35390.1     - - - - - M S S Y M H P L L G Q E L H L Q R P E D S R T P P D Q N N M E L N R S E A D E A K A E T T P T G G A T S S A T
gm031763_Glyma1    M A N R W W T G N V G M I R E Q E L M - - - - E N S - - - - N N N N - - - - - - - - - - - - A T T T P T N S S N S N T N
 
AT4G35390.1     A S - - - - - - - - - - - - - - - - - - - - - - - - - G S - - - S S G R R P R G R P A G S K N K P K P P T I I T R D S P
gm031763_Glyma1    A N T N T T E E E V S R D N G E D L Q N Q N L G S H E G S E P G S S G R R P R G R P P G S K N K P K P P I V I T K E S P
 
AT4G35390.1     N V L R S H V L E V T S G S D I S E A V S T Y A T R R G C G V C I I S G T G A V T N V T I R Q P A A P A G G G V I T L H
gm031763_Glyma1    N A L R S H V L E I T S G S D V A E S I A A F A N R R H R G V S V L S G S G I V A N V T L R Q P A A P A - - G V I T L H
 
AT4G35390.1     G R F D I L S L T G T A L P P P A P P G A G G L T V Y L A G G Q G Q V V G G N V A G S L I A S G P V V L M A A S F A N A
gm031763_Glyma1    G R F E I L S L S G A F L P S P S P P G A T G L T V Y L A G G Q G Q V V G G T V A G S L V A S G P V M V I A A T F A N A
 
AT4G35390.1     V Y D R L P I E E E E T P P P R T T G V Q - Q Q Q P E A S Q S S E V T G S G A Q A C E S N L Q G G N G G G G V A F Y N L
gm031763_Glyma1    T Y E R L P L E D E Q G - - - - E E G M Q V Q Q Q Q Q Q Q Q Q Q Q S Q G L G E Q V - - - - - - - - - - - - S M P M Y N L
 
AT4G35390.1     G M N - M N N F Q F S G G D I Y G M S G G S G G G G G G A T R - - P A F
gm031763_Glyma1    P P N L L H N G Q N M P H D V L - - - - - - - - - W G A P P R P P P S F
 
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