fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G35550.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002505 not found in 248aa AT4G35550.1 1st_1st 0.599593495 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G35550.1     MMEWDNQLQPNNHHSSN---------LQGIDVN-GGSGAGGGMYVKVMTDEQYETLRKQI
pt002505_POPTR_ -MDWDNNQE--NHQDSHQNQRECRNGINGTNVNVNGNGGTNMLYVKVMTDEQLETLRKQI
                 *:***: :  **:.*:         ::* :** .*.*. . :********* *******

AT4G35550.1     AIYGTICERLVEMHKTLTAQQDLAGGRMGGLYADPMMSSLGHKMTARQRWTPTPVQLQIL
pt002505_POPTR_ AVYAAICEQLVEMHKTLSAQQDLAGGRLGNLYCDPLMASGGHKITARQRWTPTPVQLQIL
                *:*.:***:********:*********:*.**.**:*:* ***:****************

AT4G35550.1     ERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRKQHGGGSSGNNNG
pt002505_POPTR_ ERIFDQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQLVASS---NNA
                *******.*********:**.********:* *****************  ..*   **.

AT4G35550.1     ESEVETEVEALNEKRVVRPESLLGLPDGNSNNNGLGTTTATTTAPRPEDLCFQSPEISSD
pt002505_POPTR_ ESEVETEVDSLNEKK--KPEIF----------------HAQQNPPRAEDLCFQSPEISSE
                ********::****:  :** :                 *  ..**.************:

AT4G35550.1     LHLLDVLSNPRDEHLVGKMGLAESYNLYDHVEDYGMSG
pt002505_POPTR_ LHFLG------DDHLTGKMGVPGNYNLYDQAEDYGMAG
                **:*.      *:**.****:. .*****:.*****:*
BoxShade v3.31 C (beta, 970507) Output
AT4G35550.1     M M E W D N Q L Q P N N H H S S N - - - - - - - - - L Q G I D V N - G G S G A G G G M Y V K V M T D E Q Y E T L R K Q I
pt002505_POPTR_    - M D W D N N Q E - - N H Q D S H Q N Q R E C R N G I N G T N V N V N G N G G T N M L Y V K V M T D E Q L E T L R K Q I
 
AT4G35550.1     A I Y G T I C E R L V E M H K T L T A Q Q D L A G G R M G G L Y A D P M M S S L G H K M T A R Q R W T P T P V Q L Q I L
pt002505_POPTR_    A V Y A A I C E Q L V E M H K T L S A Q Q D L A G G R L G N L Y C D P L M A S G G H K I T A R Q R W T P T P V Q L Q I L
 
AT4G35550.1     E R I F D Q G T G T P S K Q K I K D I T E E L S Q H G Q I A E Q N V Y N W F Q N R R A R S K R K Q H G G G S S G N N N G
pt002505_POPTR_    E R I F D Q G N G T P S K Q K I K E I T S E L S Q H G Q I S E T N V Y N W F Q N R R A R S K R K Q L V A S S - - - N N A
 
AT4G35550.1     E S E V E T E V E A L N E K R V V R P E S L L G L P D G N S N N N G L G T T T A T T T A P R P E D L C F Q S P E I S S D
pt002505_POPTR_    E S E V E T E V D S L N E K K - - K P E I F - - - - - - - - - - - - - - - - H A Q Q N P P R A E D L C F Q S P E I S S E
 
AT4G35550.1     L H L L D V L S N P R D E H L V G K M G L A E S Y N L Y D H V E D Y G M S G
pt002505_POPTR_    L H F L G - - - - - - D D H L T G K M G V P G N Y N L Y D Q A E D Y G M A G
 
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