fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G35900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002107 not found in 280aa AT4G35900.1 1st_1st 0.322738386 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G35900.1     MLSSAKHQRNHRLSATNKNQTLTKVSSISSSSPSSSSSSSSTSSSSPLPSQDSQAQKRSL
pt002107_POPTR_ MLSPPNCEGT---SYNNKTKSLRKVS--SSISSKSSSTSSSPSIFSPSNNLHCQAQQKA-
                ***..: : .   * .**.::* ***  ** *..***:***.*  **  . ..***::: 

AT4G35900.1     VTMEEVWNDINLASIH-------------HLNRHSPHPQHNHEPRFRGQNHHNQN-PNSI
pt002107_POPTR_ ETMEEVWKDISLASLHDHTSTDQELSMTPRLHNISHHHRHHH-------HHHNNNSPNFI
                 ******:**.***:*             :*:. * * :*:*       :***:* ** *

AT4G35900.1     FQDFLKGSLNQEPAPTSQTT---GSAPNGDSTTVTVLYSSPFPPPATVLSLNSGAGFEFL
pt002107_POPTR_ LQDFLARPFNKDP-PTRMVSIIRDSTPFGSSA----------PPPATVLSLNSGPGFDFL
                :****  .:*::* **  .:   .*:* *.*:          ************.**:**

AT4G35900.1     DNQDPLVTSNSNLHTHHHLSNAHAFNTSFEALVPS---SSFGKKRGQDSNEGSGNRRHKR
pt002107_POPTR_ ENSDHPQRPDSQLQS-NPISNISSFTSPFEGLDSSPGLPSFCKKRTQESDGSSGDRRHKR
                :*.*    .:*:*:: : :**  :*.:.**.* .*   .** *** *:*: .**:*****

AT4G35900.1     MIKNRESAARSRARKQEC------------------------LY-------------KRV
pt002107_POPTR_ MIKNRESAARSRARKQESPFLFKDSFSYILKRQQEEVIKLLKLYLAAAAQLPKKHTLQRT
                *****************.                        **             :*.

AT4G35900.1     RT---
pt002107_POPTR_ STAPF
                 *
BoxShade v3.31 C (beta, 970507) Output
AT4G35900.1     M L S S A K H Q R N H R L S A T N K N Q T L T K V S S I S S S S P S S S S S S S S T S S S S P L P S Q D S Q A Q K R S L
pt002107_POPTR_    M L S P P N C E G T - - - S Y N N K T K S L R K V S - - S S I S S K S S S T S S S P S I F S P S N N L H C Q A Q Q K A -
 
AT4G35900.1     V T M E E V W N D I N L A S I H - - - - - - - - - - - - - H L N R H S P H P Q H N H E P R F R G Q N H H N Q N - P N S I
pt002107_POPTR_    E T M E E V W K D I S L A S L H D H T S T D Q E L S M T P R L H N I S H H H R H H H - - - - - - - H H H N N N S P N F I
 
AT4G35900.1     F Q D F L K G S L N Q E P A P T S Q T T - - - G S A P N G D S T T V T V L Y S S P F P P P A T V L S L N S G A G F E F L
pt002107_POPTR_    L Q D F L A R P F N K D P - P T R M V S I I R D S T P F G S S A - - - - - - - - - - P P P A T V L S L N S G P G F D F L
 
AT4G35900.1     D N Q D P L V T S N S N L H T H H H L S N A H A F N T S F E A L V P S - - - S S F G K K R G Q D S N E G S G N R R H K R
pt002107_POPTR_    E N S D H P Q R P D S Q L Q S - N P I S N I S S F T S P F E G L D S S P G L P S F C K K R T Q E S D G S S G D R R H K R
 
AT4G35900.1     M I K N R E S A A R S R A R K Q E C - - - - - - - - - - - - - - - - - - - - - - - - L Y - - - - - - - - - - - - - K R V
pt002107_POPTR_    M I K N R E S A A R S R A R K Q E S P F L F K D S F S Y I L K R Q Q E E V I K L L K L Y L A A A A Q L P K K H T L Q R T
 
AT4G35900.1     R T - - -
pt002107_POPTR_    S T A P F
 
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