fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb008392 not found in 98aa AT2G21650.1 1st_not 0.761904761 II
Gm032707 not found in 130aa AT4G39250.1 1st_not 0.780952380 II
Pt000491 not found in 85aa AT4G39250.1 1st_not 0.819047619 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G36570.1     ------------------------------------------------------------
gm032707_Glyma1 MASSSLSKQKASDSSWTPKQNKLFEKALAKYDKDTPDRWQNVAKAV-GGKSADEVKRHYE
pt000491_POPTR_ MASNSLNSSRNCSSSWTPKQNKLFEKALALYDKDTPDRWHNVAKAV-GGKSAEEVERHYE
Sb008392_Sorbi1 MATMSLSSTRA---QWTAKQNKLFEQALAVYDRDTPDRWHNIARAVGGGKSADEVRRYYE
                                                                            

AT4G36570.1     ------------------------------------------------------------
gm032707_Glyma1 ILLEDLRHIESGHVPLPKYKSTGSSTNVEEEERKEKKRPLTKIIDTFFQFLNVFTRHFQN
pt000491_POPTR_ ILIKDVREIESGRVPFPNYRSSGNSN----------------------------------
Sb008392_Sorbi1 LLVKDVEHIEAGKVPFPAYRCPAGYD----ADRIDRSPAL---------------KHLKI
                                                                            

AT4G36570.1     -----------
gm032707_Glyma1 STLNYLVTYSI
pt000491_POPTR_ -----------
Sb008392_Sorbi1 -----------
BoxShade v3.31 C (beta, 970507) Output
AT4G36570.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm032707_Glyma1    M A S S S L S K Q K A S D S S W T P K Q N K L F E K A L A K Y D K D T P D R W Q N V A K A V - G G K S A D E V K R H Y E
pt000491_POPTR_    M A S N S L N S S R N C S S S W T P K Q N K L F E K A L A L Y D K D T P D R W H N V A K A V - G G K S A E E V E R H Y E
Sb008392_Sorbi1    M A T M S L S S T R A - - - Q W T A K Q N K L F E Q A L A V Y D R D T P D R W H N I A R A V G G G K S A D E V R R Y Y E
 
AT4G36570.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm032707_Glyma1    I L L E D L R H I E S G H V P L P K Y K S T G S S T N V E E E E R K E K K R P L T K I I D T F F Q F L N V F T R H F Q N
pt000491_POPTR_    I L I K D V R E I E S G R V P F P N Y R S S G N S N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb008392_Sorbi1    L L V K D V E H I E A G K V P F P A Y R C P A G Y D - - - - A D R I D R S P A L - - - - - - - - - - - - - - - K H L K I
 
AT4G36570.1     - - - - - - - - - - -
gm032707_Glyma1    S T L N Y L V T Y S I
pt000491_POPTR_    - - - - - - - - - - -
Sb008392_Sorbi1    - - - - - - - - - - -
 
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