fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033118 not found in 238aa AT1G75250.1 not_not 0.752380952 III
Gm030637 not found in 91aa AT1G19510.1 not_not 0.761904761 III
Gm008527 not found in 72aa AT1G75250.1 not_not 0.752380952 III
Pt018851 not found in 99aa AT4G39250.1 not_not 0.809523809 III
Pt037449 not found in 78aa AT4G39250.1 not_not 0.8 III
Pt021017 not found in 87aa AT2G21650.1 not_not 0.780952380 III
Pt038744 not found in 99aa AT1G75250.2 not_not 0.771428571 III
Pt000040 not found in 84aa AT1G75250.1 not_not 0.761904761 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G36570.1     ------------------------------------------------------------
pt021017_POPTR_ --MASSSMSSRGS----------------GSWTVQQNKAF--------------------
pt018851_POPTR_ --MASSSVSSRGS----------------GSWTAQQNKAF--------------------
gm030637_Glyma1 --MASSSLSKQKAS--------------DSSWTPKQNKLF--------------------
pt037449_POPTR_ --MSSNSLT---------------------SWTPKQNKLF--------------------
pt038744_POPTR_ --MSYFTSSNGSG----------------SSWTAKQNKLF--------------------
pt000040_POPTR_ --MAYFTSSHGSS----------------SSWTPKQNKLF--------------------
gm008527_Glyma0 --MASSTLSKQKPY--------------DSCWTPKQNKVF--------------------
Sb033118_Sorbi1 FLLSHHYLQLQLGPLHACCPINPIYTHVCIFWIIDRSSYYVHHLRRSSDVSACMSGGPVA
                                                                            

AT4G36570.1     ------------------------------------------------------------
pt021017_POPTR_ -------ERALAVYDRD---------TPDRWYNVARAVG-GKTAEEVKR----HYELLVE
pt018851_POPTR_ -------ERALAVYDRD---------TPDRWHNVARAVG-GKTAEEVKR----HYEILVE
gm030637_Glyma1 -------EKALAKYDKD---------TPERWQNVAKAVG-GKSADEVKR----HYEILLE
pt037449_POPTR_ -------EKALALHDKD---------TPDRWHNVAKAVG-GKSAEEVKR----HYEILIK
pt038744_POPTR_ -------EKALAVYDKD---------TPDRWQNVAKAVG-GKSPEEVKR----HYDRLVE
pt000040_POPTR_ -------EKALAVYDKD---------TPDRWQNVAKAVG-GKSAEEVKM----HYDRLVE
gm008527_Glyma0 -------EKALAKYDKD---------TPDRWHNVAKAIG-GKSEDDVKR----HYQILLE
Sb033118_Sorbi1 GGAAVGREGHLAGLDVADVLLQQVVVAPDVLGGLAAADGAGDVVPPVRRVLVVNGQRLLE
                                                                            

AT4G36570.1     ---------------------------------------------------------
pt021017_POPTR_ DVKHIESGHVPFPNYRTT-------------------GANGHARG------------
pt018851_POPTR_ DVKHIESGRVPFPNYRTT-------------------GANGHSKTGEEKMMKNMKLQ
gm030637_Glyma1 DLRHIESGRVPLPKYKST-------------------GSSTNVDEEE----------
pt037449_POPTR_ DVREIESGRVPFPNYRSS-------------------G-NGN---------------
pt038744_POPTR_ DLVYIESGQAPLPNYKPS-------------------GSNGRGLVEEQRLTRNLKLQ
pt000040_POPTR_ DLTYIESGQAPLPNYKPS-------------------GSNST---------------
gm008527_Glyma0 DLRHIESGH------------------------------------------------
Sb033118_Sorbi1 QLVLL---RRPLRARRCARHRLHRRHSVAFLELAREEGS------------------
BoxShade v3.31 C (beta, 970507) Output
AT4G36570.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt021017_POPTR_    - - M A S S S M S S R G S - - - - - - - - - - - - - - - - G S W T V Q Q N K A F - - - - - - - - - - - - - - - - - - - -
pt018851_POPTR_    - - M A S S S V S S R G S - - - - - - - - - - - - - - - - G S W T A Q Q N K A F - - - - - - - - - - - - - - - - - - - -
gm030637_Glyma1    - - M A S S S L S K Q K A S - - - - - - - - - - - - - - D S S W T P K Q N K L F - - - - - - - - - - - - - - - - - - - -
pt037449_POPTR_    - - M S S N S L T - - - - - - - - - - - - - - - - - - - - - S W T P K Q N K L F - - - - - - - - - - - - - - - - - - - -
pt038744_POPTR_    - - M S Y F T S S N G S G - - - - - - - - - - - - - - - - S S W T A K Q N K L F - - - - - - - - - - - - - - - - - - - -
pt000040_POPTR_    - - M A Y F T S S H G S S - - - - - - - - - - - - - - - - S S W T P K Q N K L F - - - - - - - - - - - - - - - - - - - -
gm008527_Glyma0    - - M A S S T L S K Q K P Y - - - - - - - - - - - - - - D S C W T P K Q N K V F - - - - - - - - - - - - - - - - - - - -
Sb033118_Sorbi1    F L L S H H Y L Q L Q L G P L H A C C P I N P I Y T H V C I F W I I D R S S Y Y V H H L R R S S D V S A C M S G G P V A
 
AT4G36570.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt021017_POPTR_    - - - - - - - E R A L A V Y D R D - - - - - - - - - T P D R W Y N V A R A V G - G K T A E E V K R - - - - H Y E L L V E
pt018851_POPTR_    - - - - - - - E R A L A V Y D R D - - - - - - - - - T P D R W H N V A R A V G - G K T A E E V K R - - - - H Y E I L V E
gm030637_Glyma1    - - - - - - - E K A L A K Y D K D - - - - - - - - - T P E R W Q N V A K A V G - G K S A D E V K R - - - - H Y E I L L E
pt037449_POPTR_    - - - - - - - E K A L A L H D K D - - - - - - - - - T P D R W H N V A K A V G - G K S A E E V K R - - - - H Y E I L I K
pt038744_POPTR_    - - - - - - - E K A L A V Y D K D - - - - - - - - - T P D R W Q N V A K A V G - G K S P E E V K R - - - - H Y D R L V E
pt000040_POPTR_    - - - - - - - E K A L A V Y D K D - - - - - - - - - T P D R W Q N V A K A V G - G K S A E E V K M - - - - H Y D R L V E
gm008527_Glyma0    - - - - - - - E K A L A K Y D K D - - - - - - - - - T P D R W H N V A K A I G - G K S E D D V K R - - - - H Y Q I L L E
Sb033118_Sorbi1    G G A A V G R E G H L A G L D V A D V L L Q Q V V V A P D V L G G L A A A D G A G D V V P P V R R V L V V N G Q R L L E
 
AT4G36570.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt021017_POPTR_    D V K H I E S G H V P F P N Y R T T - - - - - - - - - - - - - - - - - - - G A N G H A R G - - - - - - - - - - - -
pt018851_POPTR_    D V K H I E S G R V P F P N Y R T T - - - - - - - - - - - - - - - - - - - G A N G H S K T G E E K M M K N M K L Q
gm030637_Glyma1    D L R H I E S G R V P L P K Y K S T - - - - - - - - - - - - - - - - - - - G S S T N V D E E E - - - - - - - - - -
pt037449_POPTR_    D V R E I E S G R V P F P N Y R S S - - - - - - - - - - - - - - - - - - - G - N G N - - - - - - - - - - - - - - -
pt038744_POPTR_    D L V Y I E S G Q A P L P N Y K P S - - - - - - - - - - - - - - - - - - - G S N G R G L V E E Q R L T R N L K L Q
pt000040_POPTR_    D L T Y I E S G Q A P L P N Y K P S - - - - - - - - - - - - - - - - - - - G S N S T - - - - - - - - - - - - - - -
gm008527_Glyma0    D L R H I E S G H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb033118_Sorbi1    Q L V L L - - - R R P L R A R R C A R H R L H R R H S V A F L E L A R E E G S - - - - - - - - - - - - - - - - - -
 
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