Input
| Putative repression domain
|
|
AT4G36570.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt018851 |
not found in 99aa |
AT4G39250.1 |
not_not |
0.809523809 |
III |
Pt037449 |
not found in 78aa |
AT4G39250.1 |
not_not |
0.8 |
III |
Pt021017 |
not found in 87aa |
AT2G21650.1 |
not_not |
0.780952380 |
III |
Pt038744 |
not found in 99aa |
AT1G75250.2 |
not_not |
0.771428571 |
III |
Pt000040 |
not found in 84aa |
AT1G75250.1 |
not_not |
0.761904761 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT4G36570.1 ------------------------------------------------------------
pt000040_POPTR_ MAYFTSSHGSSSSWTPKQNKLFEKALAVYDKDTPDRWQNVAKAVGGKSAEEVKMHYDRLV
pt038744_POPTR_ MSYFTSSNGSGSSWTAKQNKLFEKALAVYDKDTPDRWQNVAKAVGGKSPEEVKRHYDRLV
pt021017_POPTR_ MASSSMSSRGSGSWTVQQNKAFERALAVYDRDTPDRWYNVARAVGGKTAEEVKRHYELLV
pt037449_POPTR_ MSSNSLT-----SWTPKQNKLFEKALALHDKDTPDRWHNVAKAVGGKSAEEVKRHYEILI
pt018851_POPTR_ MASSSVSSRGSGSWTAQQNKAFERALAVYDRDTPDRWHNVARAVGGKTAEEVKRHYEILV
AT4G36570.1 ---------------------------------------
pt000040_POPTR_ EDLTYIESGQAPLPNYKPSGSNST---------------
pt038744_POPTR_ EDLVYIESGQAPLPNYKPSGSNGRGLVEEQRLTRNLKLQ
pt021017_POPTR_ EDVKHIESGHVPFPNYRTTGANGHARG------------
pt037449_POPTR_ KDVREIESGRVPFPNYRSSG-NGN---------------
pt018851_POPTR_ EDVKHIESGRVPFPNYRTTGANGHSKTGEEKMMKNMKLQ
BoxShade v3.31 C (beta, 970507) Output
AT4G36570.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt000040_POPTR_ |
M |
A |
Y |
F |
T |
S |
S |
H |
G |
S |
S |
S |
S |
W |
T |
P |
K |
Q |
N |
K |
L |
F |
E |
K |
A |
L |
A |
V |
Y |
D |
K |
D |
T |
P |
D |
R |
W |
Q |
N |
V |
A |
K |
A |
V |
G |
G |
K |
S |
A |
E |
E |
V |
K |
M |
H |
Y |
D |
R |
L |
V |
pt038744_POPTR_ |
M |
S |
Y |
F |
T |
S |
S |
N |
G |
S |
G |
S |
S |
W |
T |
A |
K |
Q |
N |
K |
L |
F |
E |
K |
A |
L |
A |
V |
Y |
D |
K |
D |
T |
P |
D |
R |
W |
Q |
N |
V |
A |
K |
A |
V |
G |
G |
K |
S |
P |
E |
E |
V |
K |
R |
H |
Y |
D |
R |
L |
V |
pt021017_POPTR_ |
M |
A |
S |
S |
S |
M |
S |
S |
R |
G |
S |
G |
S |
W |
T |
V |
Q |
Q |
N |
K |
A |
F |
E |
R |
A |
L |
A |
V |
Y |
D |
R |
D |
T |
P |
D |
R |
W |
Y |
N |
V |
A |
R |
A |
V |
G |
G |
K |
T |
A |
E |
E |
V |
K |
R |
H |
Y |
E |
L |
L |
V |
pt037449_POPTR_ |
M |
S |
S |
N |
S |
L |
T |
- |
- |
- |
- |
- |
S |
W |
T |
P |
K |
Q |
N |
K |
L |
F |
E |
K |
A |
L |
A |
L |
H |
D |
K |
D |
T |
P |
D |
R |
W |
H |
N |
V |
A |
K |
A |
V |
G |
G |
K |
S |
A |
E |
E |
V |
K |
R |
H |
Y |
E |
I |
L |
I |
pt018851_POPTR_ |
M |
A |
S |
S |
S |
V |
S |
S |
R |
G |
S |
G |
S |
W |
T |
A |
Q |
Q |
N |
K |
A |
F |
E |
R |
A |
L |
A |
V |
Y |
D |
R |
D |
T |
P |
D |
R |
W |
H |
N |
V |
A |
R |
A |
V |
G |
G |
K |
T |
A |
E |
E |
V |
K |
R |
H |
Y |
E |
I |
L |
V |
|
AT4G36570.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt000040_POPTR_ |
E |
D |
L |
T |
Y |
I |
E |
S |
G |
Q |
A |
P |
L |
P |
N |
Y |
K |
P |
S |
G |
S |
N |
S |
T |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt038744_POPTR_ |
E |
D |
L |
V |
Y |
I |
E |
S |
G |
Q |
A |
P |
L |
P |
N |
Y |
K |
P |
S |
G |
S |
N |
G |
R |
G |
L |
V |
E |
E |
Q |
R |
L |
T |
R |
N |
L |
K |
L |
Q |
pt021017_POPTR_ |
E |
D |
V |
K |
H |
I |
E |
S |
G |
H |
V |
P |
F |
P |
N |
Y |
R |
T |
T |
G |
A |
N |
G |
H |
A |
R |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt037449_POPTR_ |
K |
D |
V |
R |
E |
I |
E |
S |
G |
R |
V |
P |
F |
P |
N |
Y |
R |
S |
S |
G |
- |
N |
G |
N |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt018851_POPTR_ |
E |
D |
V |
K |
H |
I |
E |
S |
G |
R |
V |
P |
F |
P |
N |
Y |
R |
T |
T |
G |
A |
N |
G |
H |
S |
K |
T |
G |
E |
E |
K |
M |
M |
K |
N |
M |
K |
L |
Q |
|
|