fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb008392 not found in 98aa AT2G21650.1 1st_not 0.761904761 II
Sb033118 not found in 238aa AT1G75250.1 not_not 0.752380952 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G36570.1     ------------------------------------------------------------
Sb008392_Sorbi1 MATMSLSSTRAQ----------------------WTAKQNKLFEQAL-------------
Sb033118_Sorbi1 ---FLLSHHYLQLQLGPLHACCPINPIYTHVCIFWIIDRSSYYVHHLRRSSDVSACMSGG
                                                                            

AT4G36570.1     ------------------------------------------------------------
Sb008392_Sorbi1 -----AVYDRD------------------TPDRWHNIARAVGGGKSADEVRRYYELLVKD
Sb033118_Sorbi1 PVAGGAAVGREGHLAGLDVADVLLQQVVVAPDVLGGLAAADGAGDVVPPVRR---VLVVN
                                                                            

AT4G36570.1     ----------------------------------------------
Sb008392_Sorbi1 ----VEHIEAGKVPFPAYRCPAGYDADRIDRSPALKHLKI------
Sb033118_Sorbi1 GQRLLEQLVLLRRPLRARRCA----RHRLHRRHSVAFLELAREEGS
BoxShade v3.31 C (beta, 970507) Output
AT4G36570.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb008392_Sorbi1    M A T M S L S S T R A Q - - - - - - - - - - - - - - - - - - - - - - W T A K Q N K L F E Q A L - - - - - - - - - - - - -
Sb033118_Sorbi1    - - - F L L S H H Y L Q L Q L G P L H A C C P I N P I Y T H V C I F W I I D R S S Y Y V H H L R R S S D V S A C M S G G
 
AT4G36570.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb008392_Sorbi1    - - - - - A V Y D R D - - - - - - - - - - - - - - - - - - T P D R W H N I A R A V G G G K S A D E V R R Y Y E L L V K D
Sb033118_Sorbi1    P V A G G A A V G R E G H L A G L D V A D V L L Q Q V V V A P D V L G G L A A A D G A G D V V P P V R R - - - V L V V N
 
AT4G36570.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb008392_Sorbi1    - - - - V E H I E A G K V P F P A Y R C P A G Y D A D R I D R S P A L K H L K I - - - - - -
Sb033118_Sorbi1    G Q R L L E Q L V L L R R P L R A R R C A - - - - R H R L H R R H S V A F L E L A R E E G S
 
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