fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm032707 not found in 130aa AT4G39250.1 1st_not 0.780952380 II
Gm030637 not found in 91aa AT1G19510.1 not_not 0.761904761 III
Gm008527 not found in 72aa AT1G75250.1 not_not 0.752380952 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G36570.1     ------------------------------------------------------------
gm032707_Glyma1 MASSSLSKQKASDSSWTPKQNKLFEKALAKYDKDTPDRWQNVAKAVGGKSADEVKRHYEI
gm008527_Glyma0 MASSTLSKQKPYDSCWTPKQNKVFEKALAKYDKDTPDRWHNVAKAIGGKSEDDVKRHYQI
gm030637_Glyma1 MASSSLSKQKASDSSWTPKQNKLFEKALAKYDKDTPERWQNVAKAVGGKSADEVKRHYEI
                                                                            

AT4G36570.1     ------------------------------------------------------------
gm032707_Glyma1 LLEDLRHIESGHVPLPKYKSTGSSTNVEEEERKEKKRPLTKIIDTFFQFLNVFTRHFQNS
gm008527_Glyma0 LLEDLRHIESGH------------------------------------------------
gm030637_Glyma1 LLEDLRHIESGRVPLPKYKSTGSSTNVDEEE-----------------------------
                                                                            

AT4G36570.1     ----------
gm032707_Glyma1 TLNYLVTYSI
gm008527_Glyma0 ----------
gm030637_Glyma1 ----------
BoxShade v3.31 C (beta, 970507) Output
AT4G36570.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm032707_Glyma1    M A S S S L S K Q K A S D S S W T P K Q N K L F E K A L A K Y D K D T P D R W Q N V A K A V G G K S A D E V K R H Y E I
gm008527_Glyma0    M A S S T L S K Q K P Y D S C W T P K Q N K V F E K A L A K Y D K D T P D R W H N V A K A I G G K S E D D V K R H Y Q I
gm030637_Glyma1    M A S S S L S K Q K A S D S S W T P K Q N K L F E K A L A K Y D K D T P E R W Q N V A K A V G G K S A D E V K R H Y E I
 
AT4G36570.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm032707_Glyma1    L L E D L R H I E S G H V P L P K Y K S T G S S T N V E E E E R K E K K R P L T K I I D T F F Q F L N V F T R H F Q N S
gm008527_Glyma0    L L E D L R H I E S G H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm030637_Glyma1    L L E D L R H I E S G R V P L P K Y K S T G S S T N V D E E E - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G36570.1     - - - - - - - - - -
gm032707_Glyma1    T L N Y L V T Y S I
gm008527_Glyma0    - - - - - - - - - -
gm030637_Glyma1    - - - - - - - - - -
 
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