fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030034 not found in 500aa AT4G36710.1 1st_1st 0.516203703 Ia
Pt002352 EPTSVLDLRRSPSPARA in 53/548 AT4G36710.1 1st_1st 0.503472222 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G36710.1     MKIPAS-SPQ-DTTNNN-----------NNTNSTDSN-----------------------
pt002352_POPTR_ MKVPAP-SPQ-NSSSSNNQSQNPKPVSCNNTNNNSRNISFNPSNRNLCYEPTSVLDLRRS
gm030034_Glyma1 MRVPVPSSPQANPKPTNNVVRTIALPNLNTTTTTTTT--------SLCYEPTS-------
                *::*.. *** :.. .*           *.*...  .                       

AT4G36710.1     --------------HLSMDEHVMRSMDWDSIMKELELDDDSAPNSLKTGFTTTTTDSTIL
pt002352_POPTR_ PSPARAGKPASATDPIEWEDHVLQTLDWDSIMRELDFHDDSAPALIKN-----------F
gm030034_Glyma1 --------PTNDHAVLDLDDHALHNLDWDSIMKDLGLHDDSATPVLKT-FLHPDDDN---
                               :. ::*.::.:******::* :.****.  :*.            

AT4G36710.1     PLYAVDS-------NLP---GF--PDQIQPSDFESS--SDVY----PGQNQTT---GYGF
pt002352_POPTR_ PQFGPCSEPQIQSHNLP---EFTASQQIDATQFLNSEFNDMYINSIPTHNLTSLDLSHSF
gm030034_Glyma1 --------------NNPSCDDFTPFDH--ALEFTSL--SDIY----SNQNL-----AFDF
                              * *    *   ::  . :* .   .*:*    . :*      ...*

AT4G36710.1     NSLDSVDN---GGFDFIEDLIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFY
pt002352_POPTR_ HNNIGNWN---AGSDFIQELIKAADCFDSNELQVAQVILERLNHRHQSPNGKPLQRAAFF
gm030034_Glyma1 NHLPHDFNHHLNGFDFIEELIRAADCFDTKQLHVAQVILERLNQRLRSPVGKPLQRAAFY
                :      *    * ***::**:..**.::.:*::***:*.***:* :** *:*******:

AT4G36710.1     FKEALGSFL-TGSNR---NPIRLSSWSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDS
pt002352_POPTR_ FKEALQSLLTTGSTRPQTNPV-VPSWSNTVQTIKAYKAFFSISPIPMFTDFTTNQAILDS
gm030034_Glyma1 FKEALQSLL-SGSNR---TPR-ISSLVEIVHSIRTFKAFSGISPIPMFSIFTTNQIVLD-
                ***** *:* :**.*   .*  :.*  : *: *:: * : .*****:*: **:** :** 

AT4G36710.1     LSSQSSSPFVHVVDFEIGFGGQYASLMREITEKS-----VSGGFLRVTAVVAEECAVETR
pt002352_POPTR_ LNGNSV--FLHVIDFDIGFGCHYASLMRELVDKADSCNKITTPLLRITAVVTEDTVIGTK
gm030034_Glyma1 ---HAACSFMHVIDFDIGLGIQYASLMKEIAEKA-----AESPVLRITAVVPEEYAVEST
                   ::   *:**:**:**:* :*****:*:.:*:         .**:****.*: .: : 

AT4G36710.1     LVKENLTQFAAEMKIRFQIEFVLMKTFEMLSFKAIRFVEGERTVVLISPAIFRRL---SG
pt002352_POPTR_ LIKERLSQFAHELKIRFHVEFVLFPTFEMLSFKAIKFFEGEKIAVLLSPTIFRHLGSTNN
gm030034_Glyma1 LVHDNLAQFALELRIRVQVEFVALRTFENLSFKSVKFVDGENTTVLLSPAIFGHL---GN
                *:::.*:*** *::**.::*** : *** ****:::*.:**. .**:**:** :*   ..

AT4G36710.1     ITDFVNNLRRVSPKVVVFVDSEGWTE--IAGSGSFRREFVSALEFYTMVLESLDAA--AP
pt002352_POPTR_ VTMFVNDFRRVSPSVVIFVDSEGWTE--SGARLSFRRNFVNCLEFYSMMFESLDAAVITA
gm030034_Glyma1 AAAFLADVRRISPSMVVFVDGEGWAETATASAASFRRGVVSSLEYYSMMLESLDASTVGG
                 : *: :.**:**.:*:***.***:*   ..  **** .*..**:*:*::*****:    

AT4G36710.1     PGDLVKKIVEAFVLRPKISAAVETAADRRHTGEMTWREAFCAAGMRPIQLSQFADFQAEC
pt002352_POPTR_ GGDWARKI-EMCLLKPKILAAVEGCGRRMVS---PWREVFAGAGMRAVQLSQFADFQAEC
gm030034_Glyma1 GGEWVRRI-EMMQLGPKILAAVESAWRKLP----PWREAFYGAGMRPVQLSQFADFQAEC
                 *: .::* *   * *** **** .  :      .***.* .****.:************

AT4G36710.1     LLEKAQVRGFHVAKRQGELVLCWHGRALVATSAWRF
pt002352_POPTR_ LLGKVQVRGFYVAKRQAELVLCWHDRPLIATSAWKC
gm030034_Glyma1 LLAKSQIRGFHVARRQNELVLFWHDRAMVATSAWRC
                ** * *:***:**:** **** **.*.::*****:
BoxShade v3.31 C (beta, 970507) Output
AT4G36710.1     M K I P A S - S P Q - D T T N N N - - - - - - - - - - - N N T N S T D S N - - - - - - - - - - - - - - - - - - - - - - -
pt002352_POPTR_    M K V P A P - S P Q - N S S S S N N Q S Q N P K P V S C N N T N N N S R N I S F N P S N R N L C Y E P T S V L D L R R S
gm030034_Glyma1    M R V P V P S S P Q A N P K P T N N V V R T I A L P N L N T T T T T T T T - - - - - - - - S L C Y E P T S - - - - - - -
 
AT4G36710.1     - - - - - - - - - - - - - - H L S M D E H V M R S M D W D S I M K E L E L D D D S A P N S L K T G F T T T T T D S T I L
pt002352_POPTR_    P S P A R A G K P A S A T D P I E W E D H V L Q T L D W D S I M R E L D F H D D S A P A L I K N - - - - - - - - - - - F
gm030034_Glyma1    - - - - - - - - P T N D H A V L D L D D H A L H N L D W D S I M K D L G L H D D S A T P V L K T - F L H P D D D N - - -
 
AT4G36710.1     P L Y A V D S - - - - - - - N L P - - - G F - - P D Q I Q P S D F E S S - - S D V Y - - - - P G Q N Q T T - - - G Y G F
pt002352_POPTR_    P Q F G P C S E P Q I Q S H N L P - - - E F T A S Q Q I D A T Q F L N S E F N D M Y I N S I P T H N L T S L D L S H S F
gm030034_Glyma1    - - - - - - - - - - - - - - N N P S C D D F T P F D H - - A L E F T S L - - S D I Y - - - - S N Q N L - - - - - A F D F
 
AT4G36710.1     N S L D S V D N - - - G G F D F I E D L I R V V D C V E S D E L Q L A Q V V L S R L N Q R L R S P A G R P L Q R A A F Y
pt002352_POPTR_    H N N I G N W N - - - A G S D F I Q E L I K A A D C F D S N E L Q V A Q V I L E R L N H R H Q S P N G K P L Q R A A F F
gm030034_Glyma1    N H L P H D F N H H L N G F D F I E E L I R A A D C F D T K Q L H V A Q V I L E R L N Q R L R S P V G K P L Q R A A F Y
 
AT4G36710.1     F K E A L G S F L - T G S N R - - - N P I R L S S W S E I V Q R I R A I K E Y S G I S P I P L F S H F T A N Q A I L D S
pt002352_POPTR_    F K E A L Q S L L T T G S T R P Q T N P V - V P S W S N T V Q T I K A Y K A F F S I S P I P M F T D F T T N Q A I L D S
gm030034_Glyma1    F K E A L Q S L L - S G S N R - - - T P R - I S S L V E I V H S I R T F K A F S G I S P I P M F S I F T T N Q I V L D -
 
AT4G36710.1     L S S Q S S S P F V H V V D F E I G F G G Q Y A S L M R E I T E K S - - - - - V S G G F L R V T A V V A E E C A V E T R
pt002352_POPTR_    L N G N S V - - F L H V I D F D I G F G C H Y A S L M R E L V D K A D S C N K I T T P L L R I T A V V T E D T V I G T K
gm030034_Glyma1    - - - H A A C S F M H V I D F D I G L G I Q Y A S L M K E I A E K A - - - - - A E S P V L R I T A V V P E E Y A V E S T
 
AT4G36710.1     L V K E N L T Q F A A E M K I R F Q I E F V L M K T F E M L S F K A I R F V E G E R T V V L I S P A I F R R L - - - S G
pt002352_POPTR_    L I K E R L S Q F A H E L K I R F H V E F V L F P T F E M L S F K A I K F F E G E K I A V L L S P T I F R H L G S T N N
gm030034_Glyma1    L V H D N L A Q F A L E L R I R V Q V E F V A L R T F E N L S F K S V K F V D G E N T T V L L S P A I F G H L - - - G N
 
AT4G36710.1     I T D F V N N L R R V S P K V V V F V D S E G W T E - - I A G S G S F R R E F V S A L E F Y T M V L E S L D A A - - A P
pt002352_POPTR_    V T M F V N D F R R V S P S V V I F V D S E G W T E - - S G A R L S F R R N F V N C L E F Y S M M F E S L D A A V I T A
gm030034_Glyma1    A A A F L A D V R R I S P S M V V F V D G E G W A E T A T A S A A S F R R G V V S S L E Y Y S M M L E S L D A S T V G G
 
AT4G36710.1     P G D L V K K I V E A F V L R P K I S A A V E T A A D R R H T G E M T W R E A F C A A G M R P I Q L S Q F A D F Q A E C
pt002352_POPTR_    G G D W A R K I - E M C L L K P K I L A A V E G C G R R M V S - - - P W R E V F A G A G M R A V Q L S Q F A D F Q A E C
gm030034_Glyma1    G G E W V R R I - E M M Q L G P K I L A A V E S A W R K L P - - - - P W R E A F Y G A G M R P V Q L S Q F A D F Q A E C
 
AT4G36710.1     L L E K A Q V R G F H V A K R Q G E L V L C W H G R A L V A T S A W R F
pt002352_POPTR_    L L G K V Q V R G F Y V A K R Q A E L V L C W H D R P L I A T S A W K C
gm030034_Glyma1    L L A K S Q I R G F H V A R R Q N E L V L F W H D R A M V A T S A W R C
 
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