fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36780.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037180 EIGVDDLELTLGGGKA in 305/317 AT1G75080.2 1st_not 0.594005449 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G36780.1     MAAGGGGGGGGSSSGRTPTWKERENNKKRERRRRAITAKIYSGLRAQGNYKLPKHCDNNE
pt037180_POPTR_ MTAGG-------SSGRLPTWKERENNKRRERRRRAIAAKIYTGLRTQGNFKLPKHCDNNE
                *:***       **** **********:********:****:***:***:**********

AT4G36780.1     VLKALCLEAGWIVEDDGTTYRKGFKPPASDISGTPTNFSTNSSIQPSPQSSAFPSPAPSY
pt037180_POPTR_ VLKALCAEAGWIVEEDGTTYRKGCKPPPTEIAGTPTNISACSSIQPSPQSSNFPSPVASY
                ****** *******:******** ***.::*:*****:*: ********** ****..**

AT4G36780.1     HGSPVSSSFPSPSRYDGNPSSYLLLPFLHNIASSIPANLPPLRISNSAPVTPPLSSPTSR
pt037180_POPTR_ HASPTSSSFPSPSRFDGNPSTY-LLPFLRNIA-SIPTNLPPLRISNSAPVTPPLSSPTSR
                *.**.*********:*****:* *****:*** ***:***********************

AT4G36780.1     GSKRKLTSEQLPNGGSLHVLRHPLFAISAPSRLVVLVTKRHLQYRNVMSPRRI-------
pt037180_POPTR_ GSKRKADWESLSN-GTLNSLHHPLLAASAPSS----PTRRHH-----LTPATIPECDESD
                *****   *.*.* *:*: *:***:* ****      *:**      ::*  *       

AT4G36780.1     RSRIQEGGSIS---------------NLLLLLHQH------LTLFSKLLWPLI-------
pt037180_POPTR_ ASTVDSGRWVSFLAGAPHVAPPSPTFNLVKPVAQQSGFQDGVDRHGGLSWGAAAERGRGA
                 * ::.*  :*               **:  : *:      :  .. * *          

AT4G36780.1     ------------------------------------
pt037180_POPTR_ EFEFENCRVKPWEGERIHEIGVDDLELTLGGGKARG
BoxShade v3.31 C (beta, 970507) Output
AT4G36780.1     M A A G G G G G G G G S S S G R T P T W K E R E N N K K R E R R R R A I T A K I Y S G L R A Q G N Y K L P K H C D N N E
pt037180_POPTR_    M T A G G - - - - - - - S S G R L P T W K E R E N N K R R E R R R R A I A A K I Y T G L R T Q G N F K L P K H C D N N E
 
AT4G36780.1     V L K A L C L E A G W I V E D D G T T Y R K G F K P P A S D I S G T P T N F S T N S S I Q P S P Q S S A F P S P A P S Y
pt037180_POPTR_    V L K A L C A E A G W I V E E D G T T Y R K G C K P P P T E I A G T P T N I S A C S S I Q P S P Q S S N F P S P V A S Y
 
AT4G36780.1     H G S P V S S S F P S P S R Y D G N P S S Y L L L P F L H N I A S S I P A N L P P L R I S N S A P V T P P L S S P T S R
pt037180_POPTR_    H A S P T S S S F P S P S R F D G N P S T Y - L L P F L R N I A - S I P T N L P P L R I S N S A P V T P P L S S P T S R
 
AT4G36780.1     G S K R K L T S E Q L P N G G S L H V L R H P L F A I S A P S R L V V L V T K R H L Q Y R N V M S P R R I - - - - - - -
pt037180_POPTR_    G S K R K A D W E S L S N - G T L N S L H H P L L A A S A P S S - - - - P T R R H H - - - - - L T P A T I P E C D E S D
 
AT4G36780.1     R S R I Q E G G S I S - - - - - - - - - - - - - - - N L L L L L H Q H - - - - - - L T L F S K L L W P L I - - - - - - -
pt037180_POPTR_    A S T V D S G R W V S F L A G A P H V A P P S P T F N L V K P V A Q Q S G F Q D G V D R H G G L S W G A A A E R G R G A
 
AT4G36780.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt037180_POPTR_    E F E F E N C R V K P W E G E R I H E I G V D D L E L T L G G G K A R G
 
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