fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36780.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001807 EVGMDDLELTLGVGKA in 298/308 AT1G19350.6 1st_not 0.528610354 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G36780.1     MAAGGGGGGGGSSSGRTPTWKERENNKKRERRRRAITAKIYSGLRAQGNYKLPKHCDNNE
gm001807_Glyma0 MTGGG-------STGRLPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNE
                *:.**       *:** **********:********:****:******************

AT4G36780.1     VLKALCLEAGWIVEDDGTTYRKGFKPPASDISGTPTNFSTNSSIQPSPQSSAFPSPAPSY
gm001807_Glyma0 VLKALCAEAGWIVEEDGTTYRKGCKRPTSEIGGTPLNLSACSSIQASPQSSSYPSPVPSY
                ****** *******:******** * *:*:*.*** *:*: ****.*****::***.***

AT4G36780.1     HGSPVSSSFPSPSRYDGNPSSYLLLPFLHNIASSIPANLPPLRISNSAPVTPPLSSPTSR
gm001807_Glyma0 HASPTSSSFPSPTRIDGNHPSSFLIPFIRNI-TSIPANLPPLRISNSAPVTPPLSSP--R
                *.**.*******:* *** .* :*:**::** :************************  *

AT4G36780.1     GSKRKLTSEQLPNGGSLHVLRHPLFAISAPSRLVVLVTKRH-------------------
gm001807_Glyma0 SSKRK---------ADFDSLRHPLFATSAPSS----PTRRHHVATSTIPECDESDASTVD
                .****         ..:. ******* ****      *:**                   

AT4G36780.1     --------LQYR----------------NVMSPRRIRSRIQEG---GSI-------SNLL
gm001807_Glyma0 SASGRWVSFQVQTTMVAAAAAAPPSPTFNLMKPAMQQIAAQEGMQWGSVAERGRGGSDFD
                        :* :                *:*.*   :   ***   **:       *:: 

AT4G36780.1     L-----------LLHQ------HLTL-FSKLLWPLI
gm001807_Glyma0 FENGRVKPWEGERIHEVGMDDLELTLGVGKA-----
                :            :*:      .*** ..*
BoxShade v3.31 C (beta, 970507) Output
AT4G36780.1     M A A G G G G G G G G S S S G R T P T W K E R E N N K K R E R R R R A I T A K I Y S G L R A Q G N Y K L P K H C D N N E
gm001807_Glyma0    M T G G G - - - - - - - S T G R L P T W K E R E N N K R R E R R R R A I A A K I Y T G L R A Q G N Y K L P K H C D N N E
 
AT4G36780.1     V L K A L C L E A G W I V E D D G T T Y R K G F K P P A S D I S G T P T N F S T N S S I Q P S P Q S S A F P S P A P S Y
gm001807_Glyma0    V L K A L C A E A G W I V E E D G T T Y R K G C K R P T S E I G G T P L N L S A C S S I Q A S P Q S S S Y P S P V P S Y
 
AT4G36780.1     H G S P V S S S F P S P S R Y D G N P S S Y L L L P F L H N I A S S I P A N L P P L R I S N S A P V T P P L S S P T S R
gm001807_Glyma0    H A S P T S S S F P S P T R I D G N H P S S F L I P F I R N I - T S I P A N L P P L R I S N S A P V T P P L S S P - - R
 
AT4G36780.1     G S K R K L T S E Q L P N G G S L H V L R H P L F A I S A P S R L V V L V T K R H - - - - - - - - - - - - - - - - - - -
gm001807_Glyma0    S S K R K - - - - - - - - - A D F D S L R H P L F A T S A P S S - - - - P T R R H H V A T S T I P E C D E S D A S T V D
 
AT4G36780.1     - - - - - - - - L Q Y R - - - - - - - - - - - - - - - - N V M S P R R I R S R I Q E G - - - G S I - - - - - - - S N L L
gm001807_Glyma0    S A S G R W V S F Q V Q T T M V A A A A A A P P S P T F N L M K P A M Q Q I A A Q E G M Q W G S V A E R G R G G S D F D
 
AT4G36780.1     L - - - - - - - - - - - L L H Q - - - - - - H L T L - F S K L L W P L I
gm001807_Glyma0    F E N G R V K P W E G E R I H E V G M D D L E L T L G V G K A - - - - -
 
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