fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os023742 not found in 184aa AT4G36900.1 1st_1st 0.496350364 Ia
Gm001918 not found in 168aa AT4G36900.1 1st_1st 0.562043795 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G36900.1     MET-----AT---------------EVATVVSTPAVTVAAVATRKRDKPYKGIRMRKWGK
Os023742_Os06t0 MDR---REATVFLPPPPPPQPTQPQQQPAAAAVRAPVGGRGGGG--GRQYRGVRMRKWGK
gm001918_Glyma0 MESEGRREGG---------------ERETTAATRKVEGA-------ERRYKGIRMRKWGK
                *:      .                :  :..:.     .        : *:*:*******

AT4G36900.1     WVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFPELLAGVTVTGGGGG
Os023742_Os06t0 WVAEIREPNKRSRIWLGSYSTAVAAARAYDTAVFYLRGRSARLNFPDQLDG---AGGGGA
gm001918_Glyma0 WVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELL-----VREGPA
                *********************. *************** *******: *     .  * .

AT4G36900.1     GVNGGGD---MSAAYIRRKAAEVGAQVDALEAAGAGGN-----RHHHHHQHQR-------
Os023742_Os06t0 GAGGAEDHRELTAAVIRKKAAEVGARVDAQHSV-VGAAAPVPLQPPQPPPPQRR------
gm001918_Glyma0 ALVAGCD---MSAASIRKKATEVGARVDALQAT-----------LHHHYVPPRQLLSGGG
                .  .. *   ::** **:**:****:*** .:.             :     *       

AT4G36900.1     -GNHDYVDNHSDYRINDDLMECSSKEGFKRCNGSLERVDLNKLPDPETSDDD----
Os023742_Os06t0 ---------------------------------RTKNPDLNREPTPDTSDDE----
gm001918_Glyma0 GGSGDF---------------------------PVRVVDLNKMPEPESSDCEWDVN
                                                   .  ***: * *::** :
BoxShade v3.31 C (beta, 970507) Output
AT4G36900.1     M E T - - - - - A T - - - - - - - - - - - - - - - E V A T V V S T P A V T V A A V A T R K R D K P Y K G I R M R K W G K
Os023742_Os06t0    M D R - - - R E A T V F L P P P P P P Q P T Q P Q Q Q P A A A A V R A P V G G R G G G G - - G R Q Y R G V R M R K W G K
gm001918_Glyma0    M E S E G R R E G G - - - - - - - - - - - - - - - E R E T T A A T R K V E G A - - - - - - - E R R Y K G I R M R K W G K
 
AT4G36900.1     W V A E I R E P N K R S R I W L G S Y S T P E A A A R A Y D T A V F Y L R G P S A R L N F P E L L A G V T V T G G G G G
Os023742_Os06t0    W V A E I R E P N K R S R I W L G S Y S T A V A A A R A Y D T A V F Y L R G R S A R L N F P D Q L D G - - - A G G G G A
gm001918_Glyma0    W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L - - - - - V R E G P A
 
AT4G36900.1     G V N G G G D - - - M S A A Y I R R K A A E V G A Q V D A L E A A G A G G N - - - - - R H H H H H Q H Q R - - - - - - -
Os023742_Os06t0    G A G G A E D H R E L T A A V I R K K A A E V G A R V D A Q H S V - V G A A A P V P L Q P P Q P P P P Q R R - - - - - -
gm001918_Glyma0    A L V A G C D - - - M S A A S I R K K A T E V G A R V D A L Q A T - - - - - - - - - - - L H H H Y V P P R Q L L S G G G
 
AT4G36900.1     - G N H D Y V D N H S D Y R I N D D L M E C S S K E G F K R C N G S L E R V D L N K L P D P E T S D D D - - - -
Os023742_Os06t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R T K N P D L N R E P T P D T S D D E - - - -
gm001918_Glyma0    G G S G D F - - - - - - - - - - - - - - - - - - - - - - - - - - - P V R V V D L N K M P E P E S S D C E W D V N
 
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