fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001651 not found in 187aa AT5G67190.1 1st_not 0.591240875 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G36900.1     METATEVATVVSTPAVTVAAVATRKR-----DKPYKGIRMRKWGKWVAEIREPNKRSRIW
pt001651_POPTR_ MESGVD------------KEMATRKRGGMGSERQYKGIRMRKWGKWVAEIREPNKRSRIW
                **:..:              :*****     :: **************************

AT4G36900.1     LGSYSTPEAAARAYDTAVFYLRGPSARLNFPELLAGVTVTGGGGGGVNGGGDMSAAYIRR
pt001651_POPTR_ LGSYSTPVAAARAYDTAVFYLRGPSARLNFPEFLAGENFSCGG-----SYGDMSAASIRK
                ******* ************************:*** ..: **     . ****** **:

AT4G36900.1     KAAEVGAQVDALEAAGAGGNRHHHHHQH----QRGNHDYVDNHSDYRINDDLMECSSKEG
pt001651_POPTR_ RATEVGARVDAFETA-----LNHHHHRHHDDRQRNSSNSTSSNDNNETVVDSRELKSRP-
                :*:****:***:*:*      :****:*    **.. : ...:.: .   *  * .*:  

AT4G36900.1     FKRCNGSLERVDLNKLPDPETSDDD---------------
pt001651_POPTR_ ----------VDLNKVPDPEDSDGDEWERSLATGGNPMGC
                          *****:**** **.*
BoxShade v3.31 C (beta, 970507) Output
AT4G36900.1     M E T A T E V A T V V S T P A V T V A A V A T R K R - - - - - D K P Y K G I R M R K W G K W V A E I R E P N K R S R I W
pt001651_POPTR_    M E S G V D - - - - - - - - - - - - K E M A T R K R G G M G S E R Q Y K G I R M R K W G K W V A E I R E P N K R S R I W
 
AT4G36900.1     L G S Y S T P E A A A R A Y D T A V F Y L R G P S A R L N F P E L L A G V T V T G G G G G G V N G G G D M S A A Y I R R
pt001651_POPTR_    L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E F L A G E N F S C G G - - - - - S Y G D M S A A S I R K
 
AT4G36900.1     K A A E V G A Q V D A L E A A G A G G N R H H H H H Q H - - - - Q R G N H D Y V D N H S D Y R I N D D L M E C S S K E G
pt001651_POPTR_    R A T E V G A R V D A F E T A - - - - - L N H H H H R H H D D R Q R N S S N S T S S N D N N E T V V D S R E L K S R P -
 
AT4G36900.1     F K R C N G S L E R V D L N K L P D P E T S D D D - - - - - - - - - - - - - - -
pt001651_POPTR_    - - - - - - - - - - V D L N K V P D P E D S D G D E W E R S L A T G G N P M G C
 
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