fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036987 not found in 181aa AT5G67190.1 not_not 0.580291970 III
Pt016489 not found in 155aa AT1G46768.1 not_not 0.536496350 III
Pt038369 not found in 158aa AT1G46768.1 not_not 0.529197080 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G36900.1     METATEVATVVSTPAVTVAAVATRKR------DKPYKGIRMRKWGKWVAEIREPNKRSRI
pt036987_POPTR_ MESGV------------DKDMATRKRGGMES-ERQYKGIRMRKWGKWVAEIREPNKRSRI
pt038369_POPTR_ MEGECYTSPSASSSTPTISSIGKRKHGRQQNQEKPYRGIRMRKWGKWVAEIREPNKRSRI
pt016489_POPTR_ MEGGCCTSSTSTPSSTSTATTEKRKHSRQQNQEKPYRGIRMRKWGKWVAEIREPNKRSRI
                **                    .**:      :: *:***********************

AT4G36900.1     WLGSYSTPEAAARAYDTAVFYLRGPSARLNFPELLAGVTVTGGGGGGVNGGGDMSAAYIR
pt036987_POPTR_ WLGSYSTPVAAARAYDTAVFYLRGPSARLNFPEVLAAEGF-----GGGGSCGDMSAASIR
pt038369_POPTR_ WLGSYSTPIAAARAYDTAVFYLRGPSVRLNFPDLIHQE----------DELCDVSAASIR
pt016489_POPTR_ WLGSYSTPIAAARAYDTAVFYLRGPSARLNFPDLIYQE----------DELRDVSAASIR
                ******** *****************.*****:::             .   *:*** **

AT4G36900.1     RKAAEVGAQVDALEAAGAGGNRHHHHHQHQRGNHDYV-----------DNHSDYRINDDL
pt036987_POPTR_ KRATEVGAHVDAIETA-----LNHHHHHHHHLHHDDRQRNSNNSSSSNDNNETVVDSREL
pt038369_POPTR_ KKATEVGAKVDALQTA-----LH---------------------ASPGDNSPA---NRLL
pt016489_POPTR_ KKATEVGAKVDALQTA-----VH---------------------ASPEDNS------RVL
                ::*:****:***:::*      :                         **         *

AT4G36900.1     MECSSKEGFKRCNGSLERVDLNKLPDPETSDDD-----
pt036987_POPTR_ KP--------------RPVDLNKVPDPEDSDGDEWKRS
pt038369_POPTR_ LS--------------EKPDLNEYPENCDEE-------
pt016489_POPTR_ LS--------------EKPDLNKFPENSDEE-------
                                .  ***: *:   .:
BoxShade v3.31 C (beta, 970507) Output
AT4G36900.1     M E T A T E V A T V V S T P A V T V A A V A T R K R - - - - - - D K P Y K G I R M R K W G K W V A E I R E P N K R S R I
pt036987_POPTR_    M E S G V - - - - - - - - - - - - D K D M A T R K R G G M E S - E R Q Y K G I R M R K W G K W V A E I R E P N K R S R I
pt038369_POPTR_    M E G E C Y T S P S A S S S T P T I S S I G K R K H G R Q Q N Q E K P Y R G I R M R K W G K W V A E I R E P N K R S R I
pt016489_POPTR_    M E G G C C T S S T S T P S S T S T A T T E K R K H S R Q Q N Q E K P Y R G I R M R K W G K W V A E I R E P N K R S R I
 
AT4G36900.1     W L G S Y S T P E A A A R A Y D T A V F Y L R G P S A R L N F P E L L A G V T V T G G G G G G V N G G G D M S A A Y I R
pt036987_POPTR_    W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E V L A A E G F - - - - - G G G G S C G D M S A A S I R
pt038369_POPTR_    W L G S Y S T P I A A A R A Y D T A V F Y L R G P S V R L N F P D L I H Q E - - - - - - - - - - D E L C D V S A A S I R
pt016489_POPTR_    W L G S Y S T P I A A A R A Y D T A V F Y L R G P S A R L N F P D L I Y Q E - - - - - - - - - - D E L R D V S A A S I R
 
AT4G36900.1     R K A A E V G A Q V D A L E A A G A G G N R H H H H H Q H Q R G N H D Y V - - - - - - - - - - - D N H S D Y R I N D D L
pt036987_POPTR_    K R A T E V G A H V D A I E T A - - - - - L N H H H H H H H H L H H D D R Q R N S N N S S S S N D N N E T V V D S R E L
pt038369_POPTR_    K K A T E V G A K V D A L Q T A - - - - - L H - - - - - - - - - - - - - - - - - - - - - A S P G D N S P A - - - N R L L
pt016489_POPTR_    K K A T E V G A K V D A L Q T A - - - - - V H - - - - - - - - - - - - - - - - - - - - - A S P E D N S - - - - - - R V L
 
AT4G36900.1     M E C S S K E G F K R C N G S L E R V D L N K L P D P E T S D D D - - - - -
pt036987_POPTR_    K P - - - - - - - - - - - - - - R P V D L N K V P D P E D S D G D E W K R S
pt038369_POPTR_    L S - - - - - - - - - - - - - - E K P D L N E Y P E N C D E E - - - - - - -
pt016489_POPTR_    L S - - - - - - - - - - - - - - E K P D L N K F P E N S D E E - - - - - - -
 
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