fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001651 not found in 187aa AT5G67190.1 1st_not 0.591240875 II
Pt036987 not found in 181aa AT5G67190.1 not_not 0.580291970 III
Pt016489 not found in 155aa AT1G46768.1 not_not 0.536496350 III
Pt038369 not found in 158aa AT1G46768.1 not_not 0.529197080 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G36900.1     ME----TATEVATVVSTPAVTVAAVATRKR-----DKPYKGIRMRKWGKWVAEIREPNKR
pt001651_POPTR_ ME----------------SGVDKEMATRKRGGMGSERQYKGIRMRKWGKWVAEIREPNKR
pt038369_POPTR_ MEGECYTSPSASSSTPTISSIGKRKHGRQQ---NQEKPYRGIRMRKWGKWVAEIREPNKR
pt036987_POPTR_ ME----------------SGVDKDMATRKRGGMESERQYKGIRMRKWGKWVAEIREPNKR
pt016489_POPTR_ MEGGCCTSSTSTPSSTSTATTEKRKHSRQQ---NQEKPYRGIRMRKWGKWVAEIREPNKR
                **                :        *::     :: *:********************

AT4G36900.1     SRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFPELLAGVTVTGGGGGGVNGGGDMSAA
pt001651_POPTR_ SRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPEFLAGENFSCGG-----SYGDMSAA
pt038369_POPTR_ SRIWLGSYSTPIAAARAYDTAVFYLRGPSVRLNFPDLIHQED----------ELCDVSAA
pt036987_POPTR_ SRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPEVLAAEGFGGGG-----SCGDMSAA
pt016489_POPTR_ SRIWLGSYSTPIAAARAYDTAVFYLRGPSARLNFPDLIYQED----------ELRDVSAA
                *********** *****************.*****:.:                 *:***

AT4G36900.1     YIRRKAAEVGAQVDALEAAGAGGNRHHHHHQ---H----QRGN---HDYVDNHSDYRIND
pt001651_POPTR_ SIRKRATEVGARVDAFETALN----HHHHR----HHDDRQRNSSNSTSSNDNNETVVDSR
pt038369_POPTR_ SIRKKATEVGAKVDALQTAL--------------H-----------ASPGDNSPA---NR
pt036987_POPTR_ SIRKRATEVGAHVDAIETALN----HHHHHHHHLHHDDRQRNSNNSSSSNDNNETVVDSR
pt016489_POPTR_ SIRKKATEVGAKVDALQTAV--------------H-----------ASPEDNS------R
                 **::*:****:***:::*               *            .  **        

AT4G36900.1     DLMECSSKEGFKRCNGSLERVDLNKLPDPETSDDD---------------
pt001651_POPTR_ ELKS--------------RPVDLNKVPDPEDSDGDEWERSLATGGNPMGC
pt038369_POPTR_ LLLS--------------EKPDLNEYPENCDEE-----------------
pt036987_POPTR_ ELKP--------------RPVDLNKVPDPEDSDGDEWKRS----------
pt016489_POPTR_ VLLS--------------EKPDLNKFPENSDEE-----------------
                 *                .  ***: *:   .:
BoxShade v3.31 C (beta, 970507) Output
AT4G36900.1     M E - - - - T A T E V A T V V S T P A V T V A A V A T R K R - - - - - D K P Y K G I R M R K W G K W V A E I R E P N K R
pt001651_POPTR_    M E - - - - - - - - - - - - - - - - S G V D K E M A T R K R G G M G S E R Q Y K G I R M R K W G K W V A E I R E P N K R
pt038369_POPTR_    M E G E C Y T S P S A S S S T P T I S S I G K R K H G R Q Q - - - N Q E K P Y R G I R M R K W G K W V A E I R E P N K R
pt036987_POPTR_    M E - - - - - - - - - - - - - - - - S G V D K D M A T R K R G G M E S E R Q Y K G I R M R K W G K W V A E I R E P N K R
pt016489_POPTR_    M E G G C C T S S T S T P S S T S T A T T E K R K H S R Q Q - - - N Q E K P Y R G I R M R K W G K W V A E I R E P N K R
 
AT4G36900.1     S R I W L G S Y S T P E A A A R A Y D T A V F Y L R G P S A R L N F P E L L A G V T V T G G G G G G V N G G G D M S A A
pt001651_POPTR_    S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E F L A G E N F S C G G - - - - - S Y G D M S A A
pt038369_POPTR_    S R I W L G S Y S T P I A A A R A Y D T A V F Y L R G P S V R L N F P D L I H Q E D - - - - - - - - - - E L C D V S A A
pt036987_POPTR_    S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E V L A A E G F G G G G - - - - - S C G D M S A A
pt016489_POPTR_    S R I W L G S Y S T P I A A A R A Y D T A V F Y L R G P S A R L N F P D L I Y Q E D - - - - - - - - - - E L R D V S A A
 
AT4G36900.1     Y I R R K A A E V G A Q V D A L E A A G A G G N R H H H H H Q - - - H - - - - Q R G N - - - H D Y V D N H S D Y R I N D
pt001651_POPTR_    S I R K R A T E V G A R V D A F E T A L N - - - - H H H H R - - - - H H D D R Q R N S S N S T S S N D N N E T V V D S R
pt038369_POPTR_    S I R K K A T E V G A K V D A L Q T A L - - - - - - - - - - - - - - H - - - - - - - - - - - A S P G D N S P A - - - N R
pt036987_POPTR_    S I R K R A T E V G A H V D A I E T A L N - - - - H H H H H H H H L H H D D R Q R N S N N S S S S N D N N E T V V D S R
pt016489_POPTR_    S I R K K A T E V G A K V D A L Q T A V - - - - - - - - - - - - - - H - - - - - - - - - - - A S P E D N S - - - - - - R
 
AT4G36900.1     D L M E C S S K E G F K R C N G S L E R V D L N K L P D P E T S D D D - - - - - - - - - - - - - - -
pt001651_POPTR_    E L K S - - - - - - - - - - - - - - R P V D L N K V P D P E D S D G D E W E R S L A T G G N P M G C
pt038369_POPTR_    L L L S - - - - - - - - - - - - - - E K P D L N E Y P E N C D E E - - - - - - - - - - - - - - - - -
pt036987_POPTR_    E L K P - - - - - - - - - - - - - - R P V D L N K V P D P E D S D G D E W K R S - - - - - - - - - -
pt016489_POPTR_    V L L S - - - - - - - - - - - - - - E K P D L N K F P E N S D E E - - - - - - - - - - - - - - - - -
 
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