fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os023742 not found in 184aa AT4G36900.1 1st_1st 0.496350364 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G36900.1     METATEVATVV---------STPAVTVAAVATRKR--------DKPYKGIRMRKWGKWVA
Os023742_Os06t0 MDRRE--ATVFLPPPPPPQPTQPQQQPAAAAVRAPVGGRGGGGGRQYRGVRMRKWGKWVA
                *:     ***.         : *    **.*.*          .: *:*:**********

AT4G36900.1     EIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFPELLAGVTVTGGGGGGVN
Os023742_Os06t0 EIREPNKRSRIWLGSYSTAVAAARAYDTAVFYLRGRSARLNFPDQLDG---AGGGGAGAG
                ******************. *************** *******: * *   :****.*..

AT4G36900.1     GGGD---MSAAYIRRKAAEVGAQVDALEA-AGAGGNRHHHHHQ---HQRGNHDYVDNHSD
Os023742_Os06t0 GAEDHRELTAAVIRKKAAEVGARVDAQHSVVGAAAPVPLQPPQPPPPQR-----------
                *. *   ::** **:*******:*** .: .**..    :  *    **           

AT4G36900.1     YRINDDLMECSSKEGFKRCNGSLERVDLNKLPDPETSDDD
Os023742_Os06t0 ----------------RRTKNP----DLNREPTPDTSDDE
                                :* :..    ***: * *:****:
BoxShade v3.31 C (beta, 970507) Output
AT4G36900.1     M E T A T E V A T V V - - - - - - - - - S T P A V T V A A V A T R K R - - - - - - - - D K P Y K G I R M R K W G K W V A
Os023742_Os06t0    M D R R E - - A T V F L P P P P P P Q P T Q P Q Q Q P A A A A V R A P V G G R G G G G G R Q Y R G V R M R K W G K W V A
 
AT4G36900.1     E I R E P N K R S R I W L G S Y S T P E A A A R A Y D T A V F Y L R G P S A R L N F P E L L A G V T V T G G G G G G V N
Os023742_Os06t0    E I R E P N K R S R I W L G S Y S T A V A A A R A Y D T A V F Y L R G R S A R L N F P D Q L D G - - - A G G G G A G A G
 
AT4G36900.1     G G G D - - - M S A A Y I R R K A A E V G A Q V D A L E A - A G A G G N R H H H H H Q - - - H Q R G N H D Y V D N H S D
Os023742_Os06t0    G A E D H R E L T A A V I R K K A A E V G A R V D A Q H S V V G A A A P V P L Q P P Q P P P P Q R - - - - - - - - - - -
 
AT4G36900.1     Y R I N D D L M E C S S K E G F K R C N G S L E R V D L N K L P D P E T S D D D
Os023742_Os06t0    - - - - - - - - - - - - - - - - R R T K N P - - - - D L N R E P T P D T S D D E
 
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