fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033446 not found in 424aa AT2G23340.1 1st_not 0.485401459 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G36900.1     --------------METATEVATVVSTPAVTVAAVATRKRDKPYKGIRM-----RKWGKW
Sb033446_Sorbi1 PHDHHHHPRRSGNKLLLPNQPGGWRGTP------LPSARRRSPRRLPRFRCRPRRCWAPV
                              :  ..: .   .**      :.: :* .* :  *:     * *.  

AT4G36900.1     VAEIREPNKRSRIWLGSYSTPEAAARAYD-------TAVF--------YLRGPSARLNFP
Sb033446_Sorbi1 VERLR---RRQ-------GTAEAAAEVEEEEEEGGSIAAFGCASGASGWRRSAS------
                * .:*   :*.       .*.****.. :        *.*        : *..*      

AT4G36900.1     ELLAGVTVTGGGGGGV-----------------------NGGGDMSAAYIRRKAAEVGAQ
Sb033446_Sorbi1 ------RTSGRGSGWVPTPPPSPPRAPTTRPCSTSAAAPRGSTSPTSSTARR--WPITPR
                       .:* *.* *                       .*. . :::  **    : .:

AT4G36900.1     VDALEAAGAGGNRHHHHHQHQRGNHDYVDNHSDYRINDDLMECSSKEGFKRCNGSLERVD
Sb033446_Sorbi1 ATGTAARGRGSRPPPSARRRPR----------------------SAPASTRSTAALALAS
                . .  * * *..     ::: *                      *  . .*...:*  ..

AT4G36900.1     LNK-LP------------------------DPETSDDD----------------------
Sb033446_Sorbi1 LAAVLPLRSRCRPTIAAAPRTPTSTGSPPRTPQTTSDFVVVLLLPHPSTTLLVLRQNYSP
                *   **                         *:*:.*                       

AT4G36900.1     --
Sb033446_Sorbi1 KG
BoxShade v3.31 C (beta, 970507) Output
AT4G36900.1     - - - - - - - - - - - - - - M E T A T E V A T V V S T P A V T V A A V A T R K R D K P Y K G I R M - - - - - R K W G K W
Sb033446_Sorbi1    P H D H H H H P R R S G N K L L L P N Q P G G W R G T P - - - - - - L P S A R R R S P R R L P R F R C R P R R C W A P V
 
AT4G36900.1     V A E I R E P N K R S R I W L G S Y S T P E A A A R A Y D - - - - - - - T A V F - - - - - - - - Y L R G P S A R L N F P
Sb033446_Sorbi1    V E R L R - - - R R Q - - - - - - - G T A E A A A E V E E E E E E G G S I A A F G C A S G A S G W R R S A S - - - - - -
 
AT4G36900.1     E L L A G V T V T G G G G G G V - - - - - - - - - - - - - - - - - - - - - - - N G G G D M S A A Y I R R K A A E V G A Q
Sb033446_Sorbi1    - - - - - - R T S G R G S G W V P T P P P S P P R A P T T R P C S T S A A A P R G S T S P T S S T A R R - - W P I T P R
 
AT4G36900.1     V D A L E A A G A G G N R H H H H H Q H Q R G N H D Y V D N H S D Y R I N D D L M E C S S K E G F K R C N G S L E R V D
Sb033446_Sorbi1    A T G T A A R G R G S R P P P S A R R R P R - - - - - - - - - - - - - - - - - - - - - - S A P A S T R S T A A L A L A S
 
AT4G36900.1     L N K - L P - - - - - - - - - - - - - - - - - - - - - - - - D P E T S D D D - - - - - - - - - - - - - - - - - - - - - -
Sb033446_Sorbi1    L A A V L P L R S R C R P T I A A A P R T P T S T G S P P R T P Q T T S D F V V V L L L P H P S T T L L V L R Q N Y S P
 
AT4G36900.1     - -
Sb033446_Sorbi1    K G
 
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