fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030094 not found in 461aa AT2G23340.1 not_not 0.459854014 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G36900.1     -------METATEVATVVSTPAVTVAAVATRKRDKPYKGIRMRKWGKWVAEIREPNKRSR
Sb030094_Sorbi1 RDGREGSQENHANAKSSCRYHCCCCCCTCLHNPQPPSAGPQVR------ASEREREKRQR
                        *. ::. :     .   .... :: : *  * ::*      *. ** :**.*

AT4G36900.1     IWLGSYSTPEAAARAYDTAVFYLRGPSARLNFPELLAGVTVTG------------GGGGG
Sb030094_Sorbi1 L----QQPAKAGAHAGRVPVFQ-RGVGGRGRGSSSSSRSRCHGSSCGRRSRRGEDGGGAG
                :     ...:*.*:*  ..**  ** ..* . ..  :     *            ***.*

AT4G36900.1     VNGGG-----------------DMSAAYIRRKA-AEVG---------AQVDALEAA----
Sb030094_Sorbi1 CDGGGRCGGAAAGVGAPAPPAADAAASAVPRRAHAEVGQVGGGDPGAAQAHAHLAGVLRH
                 :***                 * :*: : *:* ****         **..*  *.    

AT4G36900.1     GAGGN----------------------------------------------RHH-----H
Sb030094_Sorbi1 GRGGGARLRHGRVLPSRPVGAAQLPRRDPLAVAVGGRARGRGDRPRRRWWRRRHAVRGVH
                * **.                                              *:*     *

AT4G36900.1     HHQHQRGN---------HD-----------------------------------------
Sb030094_Sorbi1 PEEGHRGGVPRGRAPDRHDGAPAAPPRAPEAPPPPPPPPPPAAAACPRARGGGAPPAGAE
                 .: :**.         **                                         

AT4G36900.1     ---------------------------------YVDNHSDYRINDD----LMECSSKEGF
Sb030094_Sorbi1 AVAAAASVERARQEPGSKPGAEPRELRRRVTSERASDTARLNVNDDVRYRLFP------F
                                                  ..: :  .:***    *:       *

AT4G36900.1     KRCNGSLERVDLNKLPDPETSDDD-
Sb030094_Sorbi1 PRRRPALQHMPLSS-PSPRTYDDPS
                 * . :*::: *.. *.*.* **
BoxShade v3.31 C (beta, 970507) Output
AT4G36900.1     - - - - - - - M E T A T E V A T V V S T P A V T V A A V A T R K R D K P Y K G I R M R K W G K W V A E I R E P N K R S R
Sb030094_Sorbi1    R D G R E G S Q E N H A N A K S S C R Y H C C C C C C T C L H N P Q P P S A G P Q V R - - - - - - A S E R E R E K R Q R
 
AT4G36900.1     I W L G S Y S T P E A A A R A Y D T A V F Y L R G P S A R L N F P E L L A G V T V T G - - - - - - - - - - - - G G G G G
Sb030094_Sorbi1    L - - - - Q Q P A K A G A H A G R V P V F Q - R G V G G R G R G S S S S S R S R C H G S S C G R R S R R G E D G G G A G
 
AT4G36900.1     V N G G G - - - - - - - - - - - - - - - - - D M S A A Y I R R K A - A E V G - - - - - - - - - A Q V D A L E A A - - - -
Sb030094_Sorbi1    C D G G G R C G G A A A G V G A P A P P A A D A A A S A V P R R A H A E V G Q V G G G D P G A A Q A H A H L A G V L R H
 
AT4G36900.1     G A G G N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R H H - - - - - H
Sb030094_Sorbi1    G R G G G A R L R H G R V L P S R P V G A A Q L P R R D P L A V A V G G R A R G R G D R P R R R W W R R R H A V R G V H
 
AT4G36900.1     H H Q H Q R G N - - - - - - - - - H D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030094_Sorbi1    P E E G H R G G V P R G R A P D R H D G A P A A P P R A P E A P P P P P P P P P P A A A A C P R A R G G G A P P A G A E
 
AT4G36900.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Y V D N H S D Y R I N D D - - - - L M E C S S K E G F
Sb030094_Sorbi1    A V A A A A S V E R A R Q E P G S K P G A E P R E L R R R V T S E R A S D T A R L N V N D D V R Y R L F P - - - - - - F
 
AT4G36900.1     K R C N G S L E R V D L N K L P D P E T S D D D -
Sb030094_Sorbi1    P R R R P A L Q H M P L S S - P S P R T Y D D P S
 
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