fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm047992 not found in 174aa AT4G36900.1 not_1st 0.521897810 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G36900.1     METATEVATVVSTPAVTVAAVATRKRD----------------KPYKGIRMRKWGKWVAE
gm047992_Glyma1 MEERDHRCSNNSTMITTTKKKTSRRSPTSDKLKNQHPCEKQAMKPYRGIRMRKWGKWVAE
                **   . .:  **  .*.   ::*:                  ***:*************

AT4G36900.1     IREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFPELLAGVTVTGGGGGGVNG
gm047992_Glyma1 IREPNKRSRIWLGSYTTPMAAARAYDTAVFYLRGPTARLNFPELLFQDDQEEGNDSVQHG
                ***************:** ****************:*********       *...  :*

AT4G36900.1     --GGDMSAAYIRRKAAEVGAQVDALEAAGAGGNRHHHHHQHQRGNHDYVDNHSDYRINDD
gm047992_Glyma1 AAAGNMSADSIRRKATQVGARVDALQTA-----LHHH-----------------------
                  .*:***  *****::***:****::*      ***                       

AT4G36900.1     LMECSSKEGFKRCNGSLERVDLNKLPDPETSDDD
gm047992_Glyma1 ---ASSTNSLKP--------DLNEFPKLESLQD-
                   .**.:.:*         ***::*. *: :*
BoxShade v3.31 C (beta, 970507) Output
AT4G36900.1     M E T A T E V A T V V S T P A V T V A A V A T R K R D - - - - - - - - - - - - - - - - K P Y K G I R M R K W G K W V A E
gm047992_Glyma1    M E E R D H R C S N N S T M I T T T K K K T S R R S P T S D K L K N Q H P C E K Q A M K P Y R G I R M R K W G K W V A E
 
AT4G36900.1     I R E P N K R S R I W L G S Y S T P E A A A R A Y D T A V F Y L R G P S A R L N F P E L L A G V T V T G G G G G G V N G
gm047992_Glyma1    I R E P N K R S R I W L G S Y T T P M A A A R A Y D T A V F Y L R G P T A R L N F P E L L F Q D D Q E E G N D S V Q H G
 
AT4G36900.1     - - G G D M S A A Y I R R K A A E V G A Q V D A L E A A G A G G N R H H H H H Q H Q R G N H D Y V D N H S D Y R I N D D
gm047992_Glyma1    A A A G N M S A D S I R R K A T Q V G A R V D A L Q T A - - - - - L H H H - - - - - - - - - - - - - - - - - - - - - - -
 
AT4G36900.1     L M E C S S K E G F K R C N G S L E R V D L N K L P D P E T S D D D
gm047992_Glyma1    - - - A S S T N S L K P - - - - - - - - D L N E F P K L E S L Q D -
 
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