fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm011914 not found in 150aa AT5G67190.1 not_not 0.547445255 III
Gm047356 not found in 147aa AT2G23340.1 not_not 0.540145985 III
Gm014043 not found in 159aa AT5G67190.1 not_not 0.532846715 III
Gm008859 not found in 160aa AT1G46768.1 not_not 0.529197080 III
Gm039398 not found in 174aa AT1G46768.1 not_not 0.525547445 III
Gm029915 not found in 153aa AT2G23340.1 not_not 0.489051094 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G36900.1     MET--------------ATEVATVVSTPA--------VTVAAVATRKRD--KPYKGIRMR
gm047356_Glyma1 MEGEEGGIATKKRGKEGETE-TT----------------------R-------YKGIRMR
gm029915_Glyma1 MEG-EG-----RRREGGERETATAAATRK--------VVEGADQRR-------YKGIRMR
gm014043_Glyma0 MEE-AG------LGDCCSSNTTI---TRK--------SEKRKQQHQQQE--KPYRGIRMR
gm011914_Glyma0 MEG-EGGSATRKRGKDGETETTT----------------------R-------YKGIRMR
gm039398_Glyma1 MED-R--------DHCCSNNSTMITTTKKRTGRRSPTSDKLKNQHREKQSMKPYRGIRMR
gm008859_Glyma0 MEE-AG------LGDCCSSNSTI---TRK--------SDKRKQQHQQQE--KPYRGIRMR
                **                 : :                       :       *:*****

AT4G36900.1     KWGKWVAEIREPNKRSRIWLGSYSTPEAAARAYDTAVFYLRGPSARLNFPELLAGVTV-T
gm047356_Glyma1 KWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFHLRGPSARLNFPELVA------
gm029915_Glyma1 KWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLI------
gm014043_Glyma0 KWGKWVAEIREPNKRSRIWLGSYATPVAAARAYDTAVFHLRGPSARLNFPELLSQDDD--
gm011914_Glyma0 KWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLA------
gm039398_Glyma1 KWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPTARLNFPELLFQDDDQE
gm008859_Glyma0 KWGKWVAEIREPNKRSRIWLGSYATPVAAARAYDTAVFHLRGPSARLNFPELLSQDDD--
                ***********************:** ***********:****:********:       

AT4G36900.1     GGGGGGVNGGGDMSAAYIRRKAAEV------GAQVDALEAAGAGGNRHHHHHQHQRGNHD
gm047356_Glyma1 AEGPAAD-----MSAASIRKKATEV------GARVDAL----------HRQHPHALPAGE
gm029915_Glyma1 GEGAAALTGGCDMSAASIRKKASELLSASCGGG------------------------SGD
gm014043_Glyma0 ----VSTQQQGKMSADSIRKKATQV------GARVDALQTA-----LQQSSSTHSISSSH
gm011914_Glyma0 AEGPAASDA--VMSAASIRKKATEV------GARVDAL----------HRQDPHAPPAGE
gm039398_Glyma1 GSDSVQHGAAGNMSADSIRRKATQV------GARVDALQTA-----LHHHAP--STNSLN
gm008859_Glyma0 ----VSTQQQGNMSADSIRKKATQV------GARVDALQTA-----LQQSSSSHSANSSH
                            ***  **:**:::      *.                          .

AT4G36900.1     YVDNHSDYRINDDLMECSSKEGFKRCNGSLER-VDLNKLPDPET-SDDD-----
gm047356_Glyma1 FAD----------------------------R-VDLNKMPEPEN-SDCDYWDRD
gm029915_Glyma1 FAV----------------------------RVVDLNKMPEPES-SDCE-WNVN
gm014043_Glyma0 V-S--------------------------YEK-PDLNEYPKPED----------
gm011914_Glyma0 FAD----------------------------R-VDLNKIPEPEN-SDCDYWGGD
gm039398_Glyma1 L------------------------------K-PDLNEFPKLEELQD-------
gm008859_Glyma0 VSS--------------------------SDK-PDLNEYPKPED----------
                                               :  ***: *. *
BoxShade v3.31 C (beta, 970507) Output
AT4G36900.1     M E T - - - - - - - - - - - - - - A T E V A T V V S T P A - - - - - - - - V T V A A V A T R K R D - - K P Y K G I R M R
gm047356_Glyma1    M E G E E G G I A T K K R G K E G E T E - T T - - - - - - - - - - - - - - - - - - - - - - R - - - - - - - Y K G I R M R
gm029915_Glyma1    M E G - E G - - - - - R R R E G G E R E T A T A A A T R K - - - - - - - - V V E G A D Q R R - - - - - - - Y K G I R M R
gm014043_Glyma0    M E E - A G - - - - - - L G D C C S S N T T I - - - T R K - - - - - - - - S E K R K Q Q H Q Q Q E - - K P Y R G I R M R
gm011914_Glyma0    M E G - E G G S A T R K R G K D G E T E T T T - - - - - - - - - - - - - - - - - - - - - - R - - - - - - - Y K G I R M R
gm039398_Glyma1    M E D - R - - - - - - - - D H C C S N N S T M I T T T K K R T G R R S P T S D K L K N Q H R E K Q S M K P Y R G I R M R
gm008859_Glyma0    M E E - A G - - - - - - L G D C C S S N S T I - - - T R K - - - - - - - - S D K R K Q Q H Q Q Q E - - K P Y R G I R M R
 
AT4G36900.1     K W G K W V A E I R E P N K R S R I W L G S Y S T P E A A A R A Y D T A V F Y L R G P S A R L N F P E L L A G V T V - T
gm047356_Glyma1    K W G K W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F H L R G P S A R L N F P E L V A - - - - - -
gm029915_Glyma1    K W G K W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L I - - - - - -
gm014043_Glyma0    K W G K W V A E I R E P N K R S R I W L G S Y A T P V A A A R A Y D T A V F H L R G P S A R L N F P E L L S Q D D D - -
gm011914_Glyma0    K W G K W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L A - - - - - -
gm039398_Glyma1    K W G K W V A E I R E P N K R S R I W L G S Y T T P V A A A R A Y D T A V F Y L R G P T A R L N F P E L L F Q D D D Q E
gm008859_Glyma0    K W G K W V A E I R E P N K R S R I W L G S Y A T P V A A A R A Y D T A V F H L R G P S A R L N F P E L L S Q D D D - -
 
AT4G36900.1     G G G G G G V N G G G D M S A A Y I R R K A A E V - - - - - - G A Q V D A L E A A G A G G N R H H H H H Q H Q R G N H D
gm047356_Glyma1    A E G P A A D - - - - - M S A A S I R K K A T E V - - - - - - G A R V D A L - - - - - - - - - - H R Q H P H A L P A G E
gm029915_Glyma1    G E G A A A L T G G C D M S A A S I R K K A S E L L S A S C G G G - - - - - - - - - - - - - - - - - - - - - - - - S G D
gm014043_Glyma0    - - - - V S T Q Q Q G K M S A D S I R K K A T Q V - - - - - - G A R V D A L Q T A - - - - - L Q Q S S S T H S I S S S H
gm011914_Glyma0    A E G P A A S D A - - V M S A A S I R K K A T E V - - - - - - G A R V D A L - - - - - - - - - - H R Q D P H A P P A G E
gm039398_Glyma1    G S D S V Q H G A A G N M S A D S I R R K A T Q V - - - - - - G A R V D A L Q T A - - - - - L H H H A P - - S T N S L N
gm008859_Glyma0    - - - - V S T Q Q Q G N M S A D S I R K K A T Q V - - - - - - G A R V D A L Q T A - - - - - L Q Q S S S S H S A N S S H
 
AT4G36900.1     Y V D N H S D Y R I N D D L M E C S S K E G F K R C N G S L E R - V D L N K L P D P E T - S D D D - - - - -
gm047356_Glyma1    F A D - - - - - - - - - - - - - - - - - - - - - - - - - - - - R - V D L N K M P E P E N - S D C D Y W D R D
gm029915_Glyma1    F A V - - - - - - - - - - - - - - - - - - - - - - - - - - - - R V V D L N K M P E P E S - S D C E - W N V N
gm014043_Glyma0    V - S - - - - - - - - - - - - - - - - - - - - - - - - - - Y E K - P D L N E Y P K P E D - - - - - - - - - -
gm011914_Glyma0    F A D - - - - - - - - - - - - - - - - - - - - - - - - - - - - R - V D L N K I P E P E N - S D C D Y W G G D
gm039398_Glyma1    L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K - P D L N E F P K L E E L Q D - - - - - - -
gm008859_Glyma0    V S S - - - - - - - - - - - - - - - - - - - - - - - - - - S D K - P D L N E Y P K P E D - - - - - - - - - -
 
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