fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001918 not found in 168aa AT4G36900.1 1st_1st 0.562043795 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G36900.1     MET-----ATEVATVVSTPAVTVAAVATRKRDKPYKGIRMRKWGKWVAEIREPNKRSRIW
gm001918_Glyma0 MESEGRREGGERETTAATRKVEGA-------ERRYKGIRMRKWGKWVAEIREPNKRSRIW
                **:     . *  *..:*  *  *       :: **************************

AT4G36900.1     LGSYSTPEAAARAYDTAVFYLRGPSARLNFPELLAGVTVTGGGGGGVNGGGDMSAAYIRR
gm001918_Glyma0 LGSYSTPVAAARAYDTAVFYLRGPSARLNFPELL-----VREGPAALVAGCDMSAASIRK
                ******* **************************     .  * ..: .* ***** **:

AT4G36900.1     KAAEVGAQVDALEAAGAGGNRHHHHHQHQR--------GNHDYVDNHSDYRINDDLMECS
gm001918_Glyma0 KATEVGARVDALQAT------LHHHYVPPRQLLSGGGGGSGDF-----------------
                **:****:****:*:       ***:   *        *. *:                 

AT4G36900.1     SKEGFKRCNGSLERVDLNKLPDPETSDDD----
gm001918_Glyma0 ----------PVRVVDLNKMPEPESSDCEWDVN
                          .:. *****:*:**:** :
BoxShade v3.31 C (beta, 970507) Output
AT4G36900.1     M E T - - - - - A T E V A T V V S T P A V T V A A V A T R K R D K P Y K G I R M R K W G K W V A E I R E P N K R S R I W
gm001918_Glyma0    M E S E G R R E G G E R E T T A A T R K V E G A - - - - - - - E R R Y K G I R M R K W G K W V A E I R E P N K R S R I W
 
AT4G36900.1     L G S Y S T P E A A A R A Y D T A V F Y L R G P S A R L N F P E L L A G V T V T G G G G G G V N G G G D M S A A Y I R R
gm001918_Glyma0    L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L - - - - - V R E G P A A L V A G C D M S A A S I R K
 
AT4G36900.1     K A A E V G A Q V D A L E A A G A G G N R H H H H H Q H Q R - - - - - - - - G N H D Y V D N H S D Y R I N D D L M E C S
gm001918_Glyma0    K A T E V G A R V D A L Q A T - - - - - - L H H H Y V P P R Q L L S G G G G G S G D F - - - - - - - - - - - - - - - - -
 
AT4G36900.1     S K E G F K R C N G S L E R V D L N K L P D P E T S D D D - - - -
gm001918_Glyma0    - - - - - - - - - - P V R V V D L N K M P E P E S S D C E W D V N
 
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