fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016807 not found in 310aa AT4G36930.1 1st_1st 0.283088235 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G36930.1     MISQREEREEKKQRVMGDKKLISSSSSSSVYDTRINHHLHHPPSSSDEISQFLRHIFDRS
pt016807_POPTR_ ---------------MED--LYGAAAA----------------TEPEEISTFLHQLLHNN
                               * *  * .::::                :..:*** **::::...

AT4G36930.1     SPLPSYYSPATTTTTASLIGVHGSGDPHADNSRSLVSHHPPSDSVLMSKRVGDFSEVLIG
pt016807_POPTR_ SSSPSKF-------------MHHALSTPVENGVELLDRH-------------RFSETECG
                *. ** :             :* : .. .:*. .*:.:*              ***.  *

AT4G36930.1     GGSGSAAACFGFSGGGNNNNVQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAVVDEA
pt016807_POPTR_ AGVNFSDPDGYYAKEGVGNAVVSKRGGVSVE--------DDLGDFSCDSEKGVEVQANTA
                .* . : .   ::  * .* * .: .*. *.        :: .::.*:**:* *. .: *

AT4G36930.1     PSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAI
pt016807_POPTR_ -------RPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAI
                        .******.*************************.******************

AT4G36930.1     EYLKQLQLQVQMLTMRNGINLHPLCLPGTTLHPLQLSQIRPP------------------
pt016807_POPTR_ EYLKQLQLQVQMLTMRNGLSLHPMCLPG-ALQPMQL-----PLSGMSFDEGIGLLTTNTL
                ******************:.***:**** :*:*:**     *                  

AT4G36930.1     --------EATNDPLLNHTNQFASTSNAP------EMINTVASSYALEPSIRSHFGPFPL
pt016807_POPTR_ TGIFSANEESSEQNSLNLPTQ-CTISNQPITIPSGTNITSSETNFGFEPQIHVNHAPFNL
                        *::::  ** ..* .: ** *        *.:  :.:.:**.*: :..** *

AT4G36930.1     LTSPVEMSREGGLTHPRLNIGHSNANITGEQALFDGQPDLKDRIT
pt016807_POPTR_ STSSKEICREGT---PQAKLEMNQTTKTSPSGVA-----------
                 **. *:.***    *: ::  .::. *. ..:
BoxShade v3.31 C (beta, 970507) Output
AT4G36930.1     M I S Q R E E R E E K K Q R V M G D K K L I S S S S S S S V Y D T R I N H H L H H P P S S S D E I S Q F L R H I F D R S
pt016807_POPTR_    - - - - - - - - - - - - - - - M E D - - L Y G A A A A - - - - - - - - - - - - - - - - T E P E E I S T F L H Q L L H N N
 
AT4G36930.1     S P L P S Y Y S P A T T T T T A S L I G V H G S G D P H A D N S R S L V S H H P P S D S V L M S K R V G D F S E V L I G
pt016807_POPTR_    S S S P S K F - - - - - - - - - - - - - M H H A L S T P V E N G V E L L D R H - - - - - - - - - - - - - R F S E T E C G
 
AT4G36930.1     G G S G S A A A C F G F S G G G N N N N V Q G N S S G T R V S S S S V G A S G N E T D E Y D C E S E E G G E A V V D E A
pt016807_POPTR_    A G V N F S D P D G Y Y A K E G V G N A V V S K R G G V S V E - - - - - - - - D D L G D F S C D S E K G V E V Q A N T A
 
AT4G36930.1     P S S K S G P S S R S S S K R C R A A E V H N L S E K R R R S R I N E K M K A L Q S L I P N S N K T D K A S M L D E A I
pt016807_POPTR_    - - - - - - - R P R S S S K R S R A A E V H N L S E K R R R S R I N E K M K A L Q N L I P N S N K T D K A S M L D E A I
 
AT4G36930.1     E Y L K Q L Q L Q V Q M L T M R N G I N L H P L C L P G T T L H P L Q L S Q I R P P - - - - - - - - - - - - - - - - - -
pt016807_POPTR_    E Y L K Q L Q L Q V Q M L T M R N G L S L H P M C L P G - A L Q P M Q L - - - - - P L S G M S F D E G I G L L T T N T L
 
AT4G36930.1     - - - - - - - - E A T N D P L L N H T N Q F A S T S N A P - - - - - - E M I N T V A S S Y A L E P S I R S H F G P F P L
pt016807_POPTR_    T G I F S A N E E S S E Q N S L N L P T Q - C T I S N Q P I T I P S G T N I T S S E T N F G F E P Q I H V N H A P F N L
 
AT4G36930.1     L T S P V E M S R E G G L T H P R L N I G H S N A N I T G E Q A L F D G Q P D L K D R I T
pt016807_POPTR_    S T S S K E I C R E G T - - - P Q A K L E M N Q T T K T S P S G V A - - - - - - - - - - -
 
0