fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029926 not found in 381aa AT4G36930.1 1st_1st 0.305147058 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G36930.1     MISQREEREEKKQRVMGDKKLISSSSSSSVYDTRINHHLHHPPSSSDEISQFLRHIFDRS
gm029926_Glyma1 ---------------MGDM-----------------YHFDKNLSSQDEISLFLRQILLRS
                               ***                  :*:.:  **.**** ***:*: **

AT4G36930.1     SPLPSYYSPATTTTTASLIGVHGSGDPHADNSRSLVSHHPP-SDSVLMSKRV--GDFSEV
gm029926_Glyma1 SS-PSHSMPAGSCTSNAA-------------QQNVNAHHPSFTASQLQDGKILAVDSTAS
                *. **:  ** : *: :              .:.: :***. : * * . ::   * :  

AT4G36930.1     LIGGGSGSAAACFGFSGGGNNNNVQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAVV
gm029926_Glyma1 FVSG----SAACSSFKGHG--------ASAANVSSSSAGVSENENDDYDCESEEGVEAPA
                ::.*    :*** .*.* *        :*.:.*****.*.* **.*:******** ** .

AT4G36930.1     DEAPSSKSGPSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLD
gm029926_Glyma1 EEVPTKAA--SSRSSSKRSRAAEVHNLSEKRRRGRINEKMKALQNLIPNSNKTDKASMLD
                :*.*:. :  ********.**************.**********.***************

AT4G36930.1     EAIEYLKQLQLQVQMLTMRNGINLHPLCLPGTTLHPLQLSQI------------------
gm029926_Glyma1 EAIEYLKQLQLQVQMLSMRNGLSLHPMCFP-EGLQPLQLSQMGMELSERNRFTSLNMSAT
                ****************:****:.***:*:*   *:******:                  

AT4G36930.1     RPPEATNDPLLNHTNQFASTSNAPEM--------INTVASSYALEPSIRSHFGPFPLLTS
gm029926_Glyma1 LPLHQDNNP-LHYASNLPNKHNLPNQPSVPYPPYIDNPETSFGLEPRIQTDMKP------
                 * .  *:* *:::.::... * *:         *:.  :*:.*** *::.: *      

AT4G36930.1     PVEMSREGG----------LTHPRLNIGHSNAN-ITGEQAL------------FDGQP-D
gm029926_Glyma1 ---LQHKGGSSEPIRGEDILQHQQSSGIHSDANTLGGSQVVKEFESGTRLSFPFDTQACE
                   :.::**          * * : .  **:** : *.*.:            ** *. :

AT4G36930.1     LKDRIT--------------------------
gm029926_Glyma1 PKDNSNSSQPCIGGRDHSGVIIRNSETNIVGR
                 **. .
BoxShade v3.31 C (beta, 970507) Output
AT4G36930.1     M I S Q R E E R E E K K Q R V M G D K K L I S S S S S S S V Y D T R I N H H L H H P P S S S D E I S Q F L R H I F D R S
gm029926_Glyma1    - - - - - - - - - - - - - - - M G D M - - - - - - - - - - - - - - - - - Y H F D K N L S S Q D E I S L F L R Q I L L R S
 
AT4G36930.1     S P L P S Y Y S P A T T T T T A S L I G V H G S G D P H A D N S R S L V S H H P P - S D S V L M S K R V - - G D F S E V
gm029926_Glyma1    S S - P S H S M P A G S C T S N A A - - - - - - - - - - - - - Q Q N V N A H H P S F T A S Q L Q D G K I L A V D S T A S
 
AT4G36930.1     L I G G G S G S A A A C F G F S G G G N N N N V Q G N S S G T R V S S S S V G A S G N E T D E Y D C E S E E G G E A V V
gm029926_Glyma1    F V S G - - - - S A A C S S F K G H G - - - - - - - - A S A A N V S S S S A G V S E N E N D D Y D C E S E E G V E A P A
 
AT4G36930.1     D E A P S S K S G P S S R S S S K R C R A A E V H N L S E K R R R S R I N E K M K A L Q S L I P N S N K T D K A S M L D
gm029926_Glyma1    E E V P T K A A - - S S R S S S K R S R A A E V H N L S E K R R R G R I N E K M K A L Q N L I P N S N K T D K A S M L D
 
AT4G36930.1     E A I E Y L K Q L Q L Q V Q M L T M R N G I N L H P L C L P G T T L H P L Q L S Q I - - - - - - - - - - - - - - - - - -
gm029926_Glyma1    E A I E Y L K Q L Q L Q V Q M L S M R N G L S L H P M C F P - E G L Q P L Q L S Q M G M E L S E R N R F T S L N M S A T
 
AT4G36930.1     R P P E A T N D P L L N H T N Q F A S T S N A P E M - - - - - - - - I N T V A S S Y A L E P S I R S H F G P F P L L T S
gm029926_Glyma1    L P L H Q D N N P - L H Y A S N L P N K H N L P N Q P S V P Y P P Y I D N P E T S F G L E P R I Q T D M K P - - - - - -
 
AT4G36930.1     P V E M S R E G G - - - - - - - - - - L T H P R L N I G H S N A N - I T G E Q A L - - - - - - - - - - - - F D G Q P - D
gm029926_Glyma1    - - - L Q H K G G S S E P I R G E D I L Q H Q Q S S G I H S D A N T L G G S Q V V K E F E S G T R L S F P F D T Q A C E
 
AT4G36930.1     L K D R I T - - - - - - - - - - - - - - - - - - - - - - - - - -
gm029926_Glyma1    P K D N S N S S Q P C I G G R D H S G V I I R N S E T N I V G R
 
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