fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36990.1 VGEGLKLFGVWLKGE at 236/284 in AT4G36990.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp001163 SNKLVKLFGVPLHSQ in 319/413 AT1G46264.1 1st_not 0.403465346 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G36990.1     MTAVTAA--------------QRSVPAPFLSKTYQLVDDHSTDDVVSWNEEGTAFVVWKT
pp001163_Pp1s85 ---MSLAFDNSETGCMLFYDCHRSVPAPFLTKTYHLVNDPATNDIVSWGEDGTTFVVWRP
                   :: *              :********:***:**:* :*:*:***.*:**:****:.

AT4G36990.1     AEFAKDLLPQYFKHNNFSSFIRQLNTYGFRKTVPDKWEFANDYFRRGGEDLLTDIRRRKS
pp001163_Pp1s85 PEFARDLLPNYFKHNNFSSFVRQLNTYGFRKVVPERWEFANDYFRRGERHLLCEIHRRKA
                .***:****:**********:**********.**::*********** ..** :*:***:

AT4G36990.1     VIASTAGKCVVVGSPSESNSGGGDDHGSSSTSSPGSSKNPGSVENM-----VADLSGENE
pp001163_Pp1s85 -LQPASGTGSAQQSRSLSPSTSIEDQAWSPISSPMSSPLPISVPTQHPTLPVMSISDENE
                 : .::*.  .  * * * * . :*:. *. *** **  * ** .      * .:*.***

AT4G36990.1     KLKRENNNLSSELAAAKKQRDELVTFLTGHLKVRPEQIDKMIK-----------GGKFKP
pp001163_Pp1s85 RLRKDNNLLLCEVSRLRRLYEETVSIIHQQYKATPTDFSALTSRVGASGQSLETAGSVTA
                :*:::** * .*::  ::  :* *:::  : *. * ::. : .           .*....

AT4G36990.1     VESDEESE----------------------------CE----------------------
pp001163_Pp1s85 LSGDAASQHRSLNPISRGDFEIPELSVHVRTTNHNFCKTISPPTFPERAPNAVFINPGNP
                :..*  *:                            *:                      

AT4G36990.1     ----GCDGGGGAEE--GVGEGLKLFGVWLKGE--------------------RKKRDRDE
pp001163_Pp1s85 KFPTGPKLTASAESLNSSNKLVKLFGVPLHSQVAISEPATIRREPAAVASTGLKRRQSDS
                    * .  ..**.  . .: :***** *:.:                     *:*: *.

AT4G36990.1     KNYVVSGSRMTEIKNVDFHAPL----------------------------WKSSKVCN--
pp001163_Pp1s85 -----PWDPVCEISDMD--APLCDQVFVRPPPRKCLRPESEPRPSPVQPPW--LLICATR
                     . . : **.::*  ***                            *    :*   

AT4G36990.1     ------
pp001163_Pp1s85 DEGVYI
BoxShade v3.31 C (beta, 970507) Output
AT4G36990.1     M T A V T A A - - - - - - - - - - - - - - Q R S V P A P F L S K T Y Q L V D D H S T D D V V S W N E E G T A F V V W K T
pp001163_Pp1s85    - - - M S L A F D N S E T G C M L F Y D C H R S V P A P F L T K T Y H L V N D P A T N D I V S W G E D G T T F V V W R P
 
AT4G36990.1     A E F A K D L L P Q Y F K H N N F S S F I R Q L N T Y G F R K T V P D K W E F A N D Y F R R G G E D L L T D I R R R K S
pp001163_Pp1s85    P E F A R D L L P N Y F K H N N F S S F V R Q L N T Y G F R K V V P E R W E F A N D Y F R R G E R H L L C E I H R R K A
 
AT4G36990.1     V I A S T A G K C V V V G S P S E S N S G G G D D H G S S S T S S P G S S K N P G S V E N M - - - - - V A D L S G E N E
pp001163_Pp1s85    - L Q P A S G T G S A Q Q S R S L S P S T S I E D Q A W S P I S S P M S S P L P I S V P T Q H P T L P V M S I S D E N E
 
AT4G36990.1     K L K R E N N N L S S E L A A A K K Q R D E L V T F L T G H L K V R P E Q I D K M I K - - - - - - - - - - - G G K F K P
pp001163_Pp1s85    R L R K D N N L L L C E V S R L R R L Y E E T V S I I H Q Q Y K A T P T D F S A L T S R V G A S G Q S L E T A G S V T A
 
AT4G36990.1     V E S D E E S E - - - - - - - - - - - - - - - - - - - - - - - - - - - - C E - - - - - - - - - - - - - - - - - - - - - -
pp001163_Pp1s85    L S G D A A S Q H R S L N P I S R G D F E I P E L S V H V R T T N H N F C K T I S P P T F P E R A P N A V F I N P G N P
 
AT4G36990.1     - - - - G C D G G G G A E E - - G V G E G L K L F G V W L K G E - - - - - - - - - - - - - - - - - - - - R K K R D R D E
pp001163_Pp1s85    K F P T G P K L T A S A E S L N S S N K L V K L F G V P L H S Q V A I S E P A T I R R E P A A V A S T G L K R R Q S D S
 
AT4G36990.1     K N Y V V S G S R M T E I K N V D F H A P L - - - - - - - - - - - - - - - - - - - - - - - - - - - - W K S S K V C N - -
pp001163_Pp1s85    - - - - - P W D P V C E I S D M D - - A P L C D Q V F V R P P P R K C L R P E S E P R P S P V Q P P W - - L L I C A T R
 
AT4G36990.1     - - - - - -
pp001163_Pp1s85    D E G V Y I
 
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