fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36990.1 VGEGLKLFGVWLKGE at 236/284 in AT4G36990.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt028610 SEVSPRLFGVSIGFK in 284/343 AT4G11660.1 not_not 0.415841584 III
Pt023495 not found in 301aa AT5G62020.1 not_not 0.403465346 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G36990.1     --------------------------MTAVTAAQRSVPAPFLSKTYQLVDDHSTDDVVSW
pt028610_POPTR_ -MPPLPVEQTGESPAACGGGAAAGGPPSGSGDSQRSLPTPFLTKTYQLVDDPSVDDLISW
pt023495_POPTR_ MSPPPLVEQN-----------STDTPTTGGGETSRTIPTPFLTKTYQIVDDHTIDDVVSW
                                           :.   :.*::*:***:****:*** : **::**

AT4G36990.1     NEEGTAFVVWKTAEFAKDLLPQYFKHNNFSSFIRQLNTYGFRKTVPDKWEFANDYFRRGG
pt028610_POPTR_ NDDGSTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFANDCFRRGE
pt023495_POPTR_ NEDGSSFIVWDPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNESFRRGE
                *::*::*:** .: **:****:**********:**********.***:***:*: **** 

AT4G36990.1     EDLLTDIRRRK------SVIASTA--GKCVVVGSPSESNSGGGDDHGSSSTSSPGSSKNP
pt028610_POPTR_ KALLRDIQRRKISTMAASAVTSASVTVAAIPTVARAVSPANSGDDQGISSTSSPGGAGTA
pt023495_POPTR_ KNLLANIQRRKI-----PAVVTAP--AAVVPAMVKTSSNSSS-DEQVISRSSSPG-----
                : ** :*:***      ..:.::.     : .   : * :.. *::  * :****     

AT4G36990.1     GSVEN--------MVADLSGENEKLKRENNNLSSELAAAKKQRDELVTFLTGHLKVRPE-
pt028610_POPTR_ GGANSFLRTTSCTTTPEILEENERLRKENSALSHELTQLRGLCNNIMVLMNNYASPQLEG
pt023495_POPTR_ -------------LSVDLIDENERLRKENVQLKGELTEMKSLCANIFSLVSTYANSR-EG
                                ::  ***:*::**  *. **:  :    ::. ::. : . : * 

AT4G36990.1     ----------QIDKMIKGGKFKPVESDEESECEGCDGGGGAEEGVGEGLKLFGVWLKGER
pt028610_POPTR_ NSGNSNNNLAEVKAAL---ELLPVA--DEVAVSGRPRGGAAATESEVSPRLFGVSIGFKR
pt023495_POPTR_ KG---------VRKML---DLLPMK--EE------EREGA---------RIFGVEVGVKR
                           :   :   .: *:   :*         *.         ::*** :  :*

AT4G36990.1     KKRDRDEKNYVVSGSR-MTEIK----NVDFHAP--------------------------L
pt028610_POPTR_ VRIDEEEEE---EGNRQQTEGKEHESDVK-AEP-------------LDGSSGNSDHQDQR
pt023495_POPTR_ GREGSGDME---EG---EAEGEEDGMQLQLRQPGCGGGLKIETNGCQDGNSNGGGDQDAP
                 : .  : :   .*    :* :    ::.   *                           

AT4G36990.1     W------KSSKVCN
pt028610_POPTR_ WLD----LGK----
pt023495_POPTR_ WLEQCHRLNQKMCD
                *       ..
BoxShade v3.31 C (beta, 970507) Output
AT4G36990.1     - - - - - - - - - - - - - - - - - - - - - - - - - - M T A V T A A Q R S V P A P F L S K T Y Q L V D D H S T D D V V S W
pt028610_POPTR_    - M P P L P V E Q T G E S P A A C G G G A A A G G P P S G S G D S Q R S L P T P F L T K T Y Q L V D D P S V D D L I S W
pt023495_POPTR_    M S P P P L V E Q N - - - - - - - - - - - S T D T P T T G G G E T S R T I P T P F L T K T Y Q I V D D H T I D D V V S W
 
AT4G36990.1     N E E G T A F V V W K T A E F A K D L L P Q Y F K H N N F S S F I R Q L N T Y G F R K T V P D K W E F A N D Y F R R G G
pt028610_POPTR_    N D D G S T F I V W R P A E F A R D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F A N D C F R R G E
pt023495_POPTR_    N E D G S S F I V W D P T V F A R D L L P K Y F K H N N F S S F V R Q L N T Y G F R K V V P D R W E F S N E S F R R G E
 
AT4G36990.1     E D L L T D I R R R K - - - - - - S V I A S T A - - G K C V V V G S P S E S N S G G G D D H G S S S T S S P G S S K N P
pt028610_POPTR_    K A L L R D I Q R R K I S T M A A S A V T S A S V T V A A I P T V A R A V S P A N S G D D Q G I S S T S S P G G A G T A
pt023495_POPTR_    K N L L A N I Q R R K I - - - - - P A V V T A P - - A A V V P A M V K T S S N S S S - D E Q V I S R S S S P G - - - - -
 
AT4G36990.1     G S V E N - - - - - - - - M V A D L S G E N E K L K R E N N N L S S E L A A A K K Q R D E L V T F L T G H L K V R P E -
pt028610_POPTR_    G G A N S F L R T T S C T T T P E I L E E N E R L R K E N S A L S H E L T Q L R G L C N N I M V L M N N Y A S P Q L E G
pt023495_POPTR_    - - - - - - - - - - - - - L S V D L I D E N E R L R K E N V Q L K G E L T E M K S L C A N I F S L V S T Y A N S R - E G
 
AT4G36990.1     - - - - - - - - - - Q I D K M I K G G K F K P V E S D E E S E C E G C D G G G G A E E G V G E G L K L F G V W L K G E R
pt028610_POPTR_    N S G N S N N N L A E V K A A L - - - E L L P V A - - D E V A V S G R P R G G A A A T E S E V S P R L F G V S I G F K R
pt023495_POPTR_    K G - - - - - - - - - V R K M L - - - D L L P M K - - E E - - - - - - E R E G A - - - - - - - - - R I F G V E V G V K R
 
AT4G36990.1     K K R D R D E K N Y V V S G S R - M T E I K - - - - N V D F H A P - - - - - - - - - - - - - - - - - - - - - - - - - - L
pt028610_POPTR_    V R I D E E E E E - - - E G N R Q Q T E G K E H E S D V K - A E P - - - - - - - - - - - - - L D G S S G N S D H Q D Q R
pt023495_POPTR_    G R E G S G D M E - - - E G - - - E A E G E E D G M Q L Q L R Q P G C G G G L K I E T N G C Q D G N S N G G G D Q D A P
 
AT4G36990.1     W - - - - - - K S S K V C N
pt028610_POPTR_    W L D - - - - L G K - - - -
pt023495_POPTR_    W L E Q C H R L N Q K M C D
 
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