fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36990.1 VGEGLKLFGVWLKGE at 236/284 in AT4G36990.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os034528 PDPSARLFGVSIGLK in 319/414 AT4G11660.1 1st_not 0.423267326 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G36990.1     ---------------------MTAVT---AAQRSVPAPFLSKTYQLVDDHSTDDVVSWNE
Os034528_Os09t0 MAEQGAGEADAGGGEPPPAAVMTAAAEALAGQRSLPTPFLTKTYQLVEDPAVDDVISWNE
                                     ***.:   *.***:*:***:******:* :.***:****

AT4G36990.1     EGTAFVVWKTAEFAKDLLPQYFKHNNFSSFIRQLNTYGFRKTVPDKWEFANDYFRRGGED
Os034528_Os09t0 DGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDCFRRGEKR
                :*::****:.****:****:**********:********** ***:****** **** : 

AT4G36990.1     LLTDIRRRKSVIASTA------------------GKCVV-------------VGSPSE--
Os034528_Os09t0 LLCDIHRRKVVAAAAAAPPPPSPGMATAAAAVASGAVTVAAAPIPMALPVTRAGSPAHSS
                ** **:*** * *::*                  *  .*             .***:.  

AT4G36990.1     ------SNSGGGDDH--GSSSTSSPGSSKNPGSVENMVADLSGENEKLKRENNNLSSELA
Os034528_Os09t0 EEQVLSSNSGSGEEHRQASGSGSAPGGGGG-GSASG--GDMGEENERLRRENARLTRELG
                      ****.*::*  .*.* *:**.. . **...  .*:. ***:*:*** .*: **.

AT4G36990.1     AAKKQRDELVTFLTGHLKVRPEQIDKMIKGGKFKPVESDEES-------ECEG-------
Os034528_Os09t0 HMKKLCNNILLLMS-----------------KYAATQHVEGSAGISSIANCSGESSEAVP
                  **  :::: :::                 *: ..:  * *       :*.*       

AT4G36990.1     ---------------CDGGGGAEEGVGEGL--------KLFGVWLKGERKKRD-----RD
Os034528_Os09t0 PPPPLPPAILDLMPSCPALATAAAAAGLAIDGEPDPSARLFGVSI-GLKRTRDDAAAAAD
                               * . . *  ..* .:        :**** : * ::.**      *

AT4G36990.1     E----KNYVVSGSRMTEIKNVDFHA------------------PLWKSSKV-------CN
Os034528_Os09t0 EDGGGEDQAEHGGADVKPEAADPHPAGGGGGSSTEASPESHPWPIYRPTPMYHAVRPTCN
                *    :: .  *.  .: : .* *.                  *:::.: :       **

AT4G36990.1     ---------------
Os034528_Os09t0 GPDRAGSDQDGSSSR
BoxShade v3.31 C (beta, 970507) Output
AT4G36990.1     - - - - - - - - - - - - - - - - - - - - - M T A V T - - - A A Q R S V P A P F L S K T Y Q L V D D H S T D D V V S W N E
Os034528_Os09t0    M A E Q G A G E A D A G G G E P P P A A V M T A A A E A L A G Q R S L P T P F L T K T Y Q L V E D P A V D D V I S W N E
 
AT4G36990.1     E G T A F V V W K T A E F A K D L L P Q Y F K H N N F S S F I R Q L N T Y G F R K T V P D K W E F A N D Y F R R G G E D
Os034528_Os09t0    D G S T F V V W R P A E F A R D L L P K Y F K H N N F S S F V R Q L N T Y G F R K I V P D R W E F A N D C F R R G E K R
 
AT4G36990.1     L L T D I R R R K S V I A S T A - - - - - - - - - - - - - - - - - - G K C V V - - - - - - - - - - - - - V G S P S E - -
Os034528_Os09t0    L L C D I H R R K V V A A A A A A P P P P S P G M A T A A A A V A S G A V T V A A A P I P M A L P V T R A G S P A H S S
 
AT4G36990.1     - - - - - - S N S G G G D D H - - G S S S T S S P G S S K N P G S V E N M V A D L S G E N E K L K R E N N N L S S E L A
Os034528_Os09t0    E E Q V L S S N S G S G E E H R Q A S G S G S A P G G G G G - G S A S G - - G D M G E E N E R L R R E N A R L T R E L G
 
AT4G36990.1     A A K K Q R D E L V T F L T G H L K V R P E Q I D K M I K G G K F K P V E S D E E S - - - - - - - E C E G - - - - - - -
Os034528_Os09t0    H M K K L C N N I L L L M S - - - - - - - - - - - - - - - - - K Y A A T Q H V E G S A G I S S I A N C S G E S S E A V P
 
AT4G36990.1     - - - - - - - - - - - - - - - C D G G G G A E E G V G E G L - - - - - - - - K L F G V W L K G E R K K R D - - - - - R D
Os034528_Os09t0    P P P P L P P A I L D L M P S C P A L A T A A A A A G L A I D G E P D P S A R L F G V S I - G L K R T R D D A A A A A D
 
AT4G36990.1     E - - - - K N Y V V S G S R M T E I K N V D F H A - - - - - - - - - - - - - - - - - - P L W K S S K V - - - - - - - C N
Os034528_Os09t0    E D G G G E D Q A E H G G A D V K P E A A D P H P A G G G G G S S T E A S P E S H P W P I Y R P T P M Y H A V R P T C N
 
AT4G36990.1     - - - - - - - - - - - - - - -
Os034528_Os09t0    G P D R A G S D Q D G S S S R
 
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