fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G36990.1 VGEGLKLFGVWLKGE at 236/284 in AT4G36990.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001890 GGDCLKLFGVWLKGD in 226/282 AT4G36990.1 1st_1st 0.502475247 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G36990.1     MTAVTAAQRSVPAPFLSKTYQLVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKH
gm001890_Glyma0 -----MSQRSVPAPFLTKTYQLVEDQGTDQVISWGESGNTFVVWKHADFAKDLLPKYFKH
                      :*********:******:*:.**:*:**.*.*.:***** *:*******:****

AT4G36990.1     NNFSSFIRQLNTYGFRKTVPDKWEFANDYFRRGGEDLLTDIRRRKSVIASTAGKCVVVGS
gm001890_Glyma0 NNFSSFVRQLNTYGFRKIVPDKWEFANEHFKRGQKELLSEIKRRKTVPQSSA-------H
                ******:********** *********::*:** ::**::*:***:*  *:*        

AT4G36990.1     PSESNSGGG----------DDHGSSSTSSPGS-SKNPGSVENMVA---DLSGENEKLKRE
gm001890_Glyma0 PPEAGKSGGDGNSPLNSGSDDAGSTSTSSSSSGSKNQGSVETNTTPSHQLSSENEKLKKD
                *.*:...**          ** **:****..* *** ****. .:   :**.******::

AT4G36990.1     NNNLSSELAAAKKQRDELVTFLTGHLKVRPEQIDKMIKGGKFKPVESDEESECEGCDGGG
gm001890_Glyma0 NETLSCELARARKQCDELVAFLRDRLMVGPDQIDRIMRQG-----------SC-------
                *:.**.*** *:** ****:** .:* * *:***:::: *           .*       

AT4G36990.1     GAEEGVGEG-----LKLFGVWLKGE-------RKKRDRDEKNYVVSGSRMTEIKN-VDFH
gm001890_Glyma0 GSENVVGEGGGGDCLKLFGVWLKGDTLTDKRNNHKRGREDQ-MGFGGPRLKESKPVVDFG
                *:*: ****     **********:       .:**.*:::   ..*.*:.* *  *** 

AT4G36990.1     AP--LWKSSKVCN
gm001890_Glyma0 AVNIMMKSNRVCN
                *   : **.:***
BoxShade v3.31 C (beta, 970507) Output
AT4G36990.1     M T A V T A A Q R S V P A P F L S K T Y Q L V D D H S T D D V V S W N E E G T A F V V W K T A E F A K D L L P Q Y F K H
gm001890_Glyma0    - - - - - M S Q R S V P A P F L T K T Y Q L V E D Q G T D Q V I S W G E S G N T F V V W K H A D F A K D L L P K Y F K H
 
AT4G36990.1     N N F S S F I R Q L N T Y G F R K T V P D K W E F A N D Y F R R G G E D L L T D I R R R K S V I A S T A G K C V V V G S
gm001890_Glyma0    N N F S S F V R Q L N T Y G F R K I V P D K W E F A N E H F K R G Q K E L L S E I K R R K T V P Q S S A - - - - - - - H
 
AT4G36990.1     P S E S N S G G G - - - - - - - - - - D D H G S S S T S S P G S - S K N P G S V E N M V A - - - D L S G E N E K L K R E
gm001890_Glyma0    P P E A G K S G G D G N S P L N S G S D D A G S T S T S S S S S G S K N Q G S V E T N T T P S H Q L S S E N E K L K K D
 
AT4G36990.1     N N N L S S E L A A A K K Q R D E L V T F L T G H L K V R P E Q I D K M I K G G K F K P V E S D E E S E C E G C D G G G
gm001890_Glyma0    N E T L S C E L A R A R K Q C D E L V A F L R D R L M V G P D Q I D R I M R Q G - - - - - - - - - - - S C - - - - - - -
 
AT4G36990.1     G A E E G V G E G - - - - - L K L F G V W L K G E - - - - - - - R K K R D R D E K N Y V V S G S R M T E I K N - V D F H
gm001890_Glyma0    G S E N V V G E G G G G D C L K L F G V W L K G D T L T D K R N N H K R G R E D Q - M G F G G P R L K E S K P V V D F G
 
AT4G36990.1     A P - - L W K S S K V C N
gm001890_Glyma0    A V N I M M K S N R V C N
 
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