fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G37180.1 TDQRMGLNLNLSIYSL at 10/363 in AT4G37180.2
TDQRMGLNLNLSIYSL at 10/356 in AT4G37180.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029962 MELSLDLSLGFVPK in 4/329 AT4G37180.1 1st_1st 0.311897106 Ib
Pt036814 MELSLDLSLVCEPK in 4/351 AT4G37180.1 1st_1st 0.347266881 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G37180.1     MVQTETDQRMGLNLNLSIYSLPKPLSQFLDEVSRIKDNHSKLSEIDGYVGKLEEERNKID
pt036814_POPTR_ ---------MELSLDLSLVCEPKTINECLKEVSMVKDGSQKLTKLYDYVERLEDERRKID
gm029962_Glyma1 ---------MELSLDLSLGFVPKPLSLFFADVSANRD---KVATLDGFVQRLEEELKKVE
                         * *.*:**:   **.:.  : :**  :*   *:: : .:* :**:* .*::

AT4G37180.1     VFKRELPLCMLLLNEAIGALKDEARKGLSLMA-------SNGKFDDVERAKPETDKKSWM
pt036814_POPTR_ AFKRELPLCMLLLNEAIARLKEEAMQCSELNDLIPLK----GNSNED-----GNDKKNWM
gm029962_Glyma1 AFKRELPLCILLLNDAIARLKEEKVKCSGMQD-PPLKTSSGGNKNES------SEKMNWM
                .********:****:**. **:*  :   :           *: ::       .:* .**

AT4G37180.1     SSAQLWISN-------PNSQFR--STNEEEEDRCVSQNPFQTCNYPNQGGVFMPFNRPPP
pt036814_POPTR_ SSVQLWNTNNHLDCKKQDSKSEPKQKSEEDDDRSTCENPVQLGDHSNKGEAFVPFKALSG
gm029962_Glyma1 SSAQLWST--------QKTKSR-----NEEDDRSVPANPIN-------------------
                **.*** :         .:: .     :*::**..  **.:                   

AT4G37180.1     ------------PPPPAPLSLMTPTSEMMMDYSRIEQSHHHHQFNKPSSQSHHIQK----
pt036814_POPTR_ FEGSKRKEEKEVVSQVTGLSPMTPVPDL-------SSCNWTRKSNNCSNQTKILSKSQQQ
gm029962_Glyma1 --GNSCVLEKE-GSQVPRFGLMARASEL-------SHSNSKSVGGDISSGSSLL---RVE
                             .  . :. *: ..::       . .:     .. *. :  :      

AT4G37180.1     --KEQRRRWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKSHLQKYRMHI
pt036814_POPTR_ AYRKQRRCWSPELHRRFVDALQQLGGCQVATPKQIREHMQVDGLTNDEVKSHLQKYRLHL
gm029962_Glyma1 NPRKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHV
                  ::*** ** ****:*****::*** *********: *:*:***************:*:

AT4G37180.1     RKHPLHPTKTLS-----SSDQPGVLERESQSLISLSRSDSPQSPLV-----------ARG
pt036814_POPTR_ RKVPASPAAPA------SQDQCK----DPSTG-NISQSNSPKGSLH-------ASGSAKA
gm029962_Glyma1 RRFPVSSTGQADNGSWMSQDESG----DKSKGNNMSQSGSPQGPLTPLILGGGGGGSAKG
                *: *  .:         *.*:      : ..  .:*:*.**:..*            *:.

AT4G37180.1     LFSSNVGHSSEEDEEEEDEEEEKSDGRSSCRNDETKKKR----QVLDLEL---
pt036814_POPTR_ T--SNTGGDSMEAED---------DDKSESHSWNGALHKPGEAHV--------
gm029962_Glyma1 L--SSPGQNSVDGE----------DEQSDCRNWKGGLHH----HQLEADNQCL
                   *. * .* : *          * :*..:. :   ::    :
BoxShade v3.31 C (beta, 970507) Output
AT4G37180.1     M V Q T E T D Q R M G L N L N L S I Y S L P K P L S Q F L D E V S R I K D N H S K L S E I D G Y V G K L E E E R N K I D
pt036814_POPTR_    - - - - - - - - - M E L S L D L S L V C E P K T I N E C L K E V S M V K D G S Q K L T K L Y D Y V E R L E D E R R K I D
gm029962_Glyma1    - - - - - - - - - M E L S L D L S L G F V P K P L S L F F A D V S A N R D - - - K V A T L D G F V Q R L E E E L K K V E
 
AT4G37180.1     V F K R E L P L C M L L L N E A I G A L K D E A R K G L S L M A - - - - - - - S N G K F D D V E R A K P E T D K K S W M
pt036814_POPTR_    A F K R E L P L C M L L L N E A I A R L K E E A M Q C S E L N D L I P L K - - - - G N S N E D - - - - - G N D K K N W M
gm029962_Glyma1    A F K R E L P L C I L L L N D A I A R L K E E K V K C S G M Q D - P P L K T S S G G N K N E S - - - - - - S E K M N W M
 
AT4G37180.1     S S A Q L W I S N - - - - - - - P N S Q F R - - S T N E E E E D R C V S Q N P F Q T C N Y P N Q G G V F M P F N R P P P
pt036814_POPTR_    S S V Q L W N T N N H L D C K K Q D S K S E P K Q K S E E D D D R S T C E N P V Q L G D H S N K G E A F V P F K A L S G
gm029962_Glyma1    S S A Q L W S T - - - - - - - - Q K T K S R - - - - - N E E D D R S V P A N P I N - - - - - - - - - - - - - - - - - - -
 
AT4G37180.1     - - - - - - - - - - - - P P P P A P L S L M T P T S E M M M D Y S R I E Q S H H H H Q F N K P S S Q S H H I Q K - - - -
pt036814_POPTR_    F E G S K R K E E K E V V S Q V T G L S P M T P V P D L - - - - - - - S S C N W T R K S N N C S N Q T K I L S K S Q Q Q
gm029962_Glyma1    - - G N S C V L E K E - G S Q V P R F G L M A R A S E L - - - - - - - S H S N S K S V G G D I S S G S S L L - - - R V E
 
AT4G37180.1     - - K E Q R R R W S Q E L H R K F V D A L H R L G G P Q V A T P K Q I R D L M K V D G L T N D E V K S H L Q K Y R M H I
pt036814_POPTR_    A Y R K Q R R C W S P E L H R R F V D A L Q Q L G G C Q V A T P K Q I R E H M Q V D G L T N D E V K S H L Q K Y R L H L
gm029962_Glyma1    N P R K Q R R C W S P E L H R R F V D A L Q Q L G G A Q V A T P K Q I R E L M Q V E G L T N D E V K S H L Q K Y R L H V
 
AT4G37180.1     R K H P L H P T K T L S - - - - - S S D Q P G V L E R E S Q S L I S L S R S D S P Q S P L V - - - - - - - - - - - A R G
pt036814_POPTR_    R K V P A S P A A P A - - - - - - S Q D Q C K - - - - D P S T G - N I S Q S N S P K G S L H - - - - - - - A S G S A K A
gm029962_Glyma1    R R F P V S S T G Q A D N G S W M S Q D E S G - - - - D K S K G N N M S Q S G S P Q G P L T P L I L G G G G G G S A K G
 
AT4G37180.1     L F S S N V G H S S E E D E E E E D E E E E K S D G R S S C R N D E T K K K R - - - - Q V L D L E L - - -
pt036814_POPTR_    T - - S N T G G D S M E A E D - - - - - - - - - D D K S E S H S W N G A L H K P G E A H V - - - - - - - -
gm029962_Glyma1    L - - S S P G Q N S V D G E - - - - - - - - - - D E Q S D C R N W K G G L H H - - - - H Q L E A D N Q C L
 
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