fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G37180.1 TDQRMGLNLNLSIYSL at 10/363 in AT4G37180.2
TDQRMGLNLNLSIYSL at 10/356 in AT4G37180.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036814 MELSLDLSLVCEPK in 4/351 AT4G37180.1 1st_1st 0.347266881 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G37180.1     MVQTETDQRMGLNLNLSIYSLPKPLSQFLDEVSRIKDNHSKLSEIDGYVGKLEEERNKID
pt036814_POPTR_ ---------MELSLDLSLVCEPKTINECLKEVSMVKDGSQKLTKLYDYVERLEDERRKID
                         * *.*:**: . **.:.: *.*** :**. .**::: .** :**:**.***

AT4G37180.1     VFKRELPLCMLLLNEAIGALKDEARKGLSL-----MASNGKFDDVERAKPETDKKSWMSS
pt036814_POPTR_ AFKRELPLCMLLLNEAIARLKEEAMQCSELNDLIPLKGNSNEDG-------NDKKNWMSS
                .****************. **:** :  .*     : .*.: *.       .***.****

AT4G37180.1     AQLWISN---------PNSQFRSTNEEEEDRCVSQNPFQTCNYPNQGGVFMPFN------
pt036814_POPTR_ VQLWNTNNHLDCKKQDSKSEPKQKSEEDDDRSTCENPVQLGDHSNKGEAFVPFKALSGFE
                .*** :*         .:*: :...**::**...:**.*  ::.*:* .*:**:      

AT4G37180.1     ------RPPPPPPPAPLSLMTPTSEM-MMDYSRIEQSHHHHQFNKPSSQSHHIQKKEQRR
pt036814_POPTR_ GSKRKEEKEVVSQVTGLSPMTPVPDLSSCNWTR--KSNNCSNQTKILSKSQQQAYRKQRR
                      .    .  : ** ***..::   :::*  :*::  : .*  *:*::   ::***

AT4G37180.1     RWSQELHRKFVDALHRLGGPQVATPKQIRDLMKVDGLTNDEVKSHLQKYRMHIRKHPLHP
pt036814_POPTR_ CWSPELHRRFVDALQQLGGCQVATPKQIREHMQVDGLTNDEVKSHLQKYRLHLRKVPASP
                 ** ****:*****::*** *********: *:*****************:*:** *  *

AT4G37180.1     TKTLSSSDQPGVLERESQSLISLSRSDSPQSPLVARGL--FSSNVGHSSEEDEEEEDEEE
pt036814_POPTR_ AAP-ASQDQC-----KDPSTGNISQSNSPKGSLHASGSAKATSNTGGDSMEAEDDDKSES
                : . :*.**      :. *  .:*:*:**:..* * *    :**.* .* * *:::..*.

AT4G37180.1     EKSDGRSSCRNDETKKKRQVLDLEL
pt036814_POPTR_ HSWNGAL-----HKPGEAHV-----
                .. :*       ..  : :*
BoxShade v3.31 C (beta, 970507) Output
AT4G37180.1     M V Q T E T D Q R M G L N L N L S I Y S L P K P L S Q F L D E V S R I K D N H S K L S E I D G Y V G K L E E E R N K I D
pt036814_POPTR_    - - - - - - - - - M E L S L D L S L V C E P K T I N E C L K E V S M V K D G S Q K L T K L Y D Y V E R L E D E R R K I D
 
AT4G37180.1     V F K R E L P L C M L L L N E A I G A L K D E A R K G L S L - - - - - M A S N G K F D D V E R A K P E T D K K S W M S S
pt036814_POPTR_    A F K R E L P L C M L L L N E A I A R L K E E A M Q C S E L N D L I P L K G N S N E D G - - - - - - - N D K K N W M S S
 
AT4G37180.1     A Q L W I S N - - - - - - - - - P N S Q F R S T N E E E E D R C V S Q N P F Q T C N Y P N Q G G V F M P F N - - - - - -
pt036814_POPTR_    V Q L W N T N N H L D C K K Q D S K S E P K Q K S E E D D D R S T C E N P V Q L G D H S N K G E A F V P F K A L S G F E
 
AT4G37180.1     - - - - - - R P P P P P P P A P L S L M T P T S E M - M M D Y S R I E Q S H H H H Q F N K P S S Q S H H I Q K K E Q R R
pt036814_POPTR_    G S K R K E E K E V V S Q V T G L S P M T P V P D L S S C N W T R - - K S N N C S N Q T K I L S K S Q Q Q A Y R K Q R R
 
AT4G37180.1     R W S Q E L H R K F V D A L H R L G G P Q V A T P K Q I R D L M K V D G L T N D E V K S H L Q K Y R M H I R K H P L H P
pt036814_POPTR_    C W S P E L H R R F V D A L Q Q L G G C Q V A T P K Q I R E H M Q V D G L T N D E V K S H L Q K Y R L H L R K V P A S P
 
AT4G37180.1     T K T L S S S D Q P G V L E R E S Q S L I S L S R S D S P Q S P L V A R G L - - F S S N V G H S S E E D E E E E D E E E
pt036814_POPTR_    A A P - A S Q D Q C - - - - - K D P S T G N I S Q S N S P K G S L H A S G S A K A T S N T G G D S M E A E D D D K S E S
 
AT4G37180.1     E K S D G R S S C R N D E T K K K R Q V L D L E L
pt036814_POPTR_    H S W N G A L - - - - - H K P G E A H V - - - - -
 
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