fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G37180.1 TDQRMGLNLNLSIYSL at 10/363 in AT4G37180.2
TDQRMGLNLNLSIYSL at 10/356 in AT4G37180.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029962 MELSLDLSLGFVPK in 4/329 AT4G37180.1 1st_1st 0.311897106 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G37180.1     MVQTETDQRMGLNLNLSIYSLPKPLSQFLDEVSRIKDNHSKLSEIDGYVGKLEEERNKID
gm029962_Glyma1 ---------MELSLDLSLGFVPKPLSLFFADVSA---NRDKVATLDGFVQRLEEELKKVE
                         * *.*:**:  :***** *: :**    *:.*:: :**:* :**** :*::

AT4G37180.1     VFKRELPLCMLLLNEAIGALKDEARK--GLS---LMASNGKFDDVERAKPETDKKSWMSS
gm029962_Glyma1 AFKRELPLCILLLNDAIARLKEEKVKCSGMQDPPLKTSSGG-----NKNESSEKMNWMSS
                .********:****:**. **:*  *  *:.   * :*.*      . : .::* .****

AT4G37180.1     AQLWISNPNSQFRSTNEEEEDRCVSQNPF--QTCNYPNQGGVFMPFNRPPPPPPPAPLSL
gm029962_Glyma1 AQLW----STQKTKSRNEEDDRSVPANPINGNSCVLEKEGS-------------------
                ****    .:*  .:.:**:**.*. **:  ::*   ::*.                   

AT4G37180.1     MTPTSEMMMDYSRIEQSHHHHQFNKPSSQSHHIQ---KKEQRRRWSQELHRKFVDALHRL
gm029962_Glyma1 QVPRFGLMARASELSHSNSKSVGGDISSGSSLLRVENPRKQRRCWSPELHRRFVDALQQL
                 .*   :*   *.:.:*: :   .. ** *  ::    ::*** ** ****:*****::*

AT4G37180.1     GGPQVATPKQIRDLMKVDGLTNDEVKSHLQKYRMHIRKHPLHPT-----KTLSSSDQPGV
gm029962_Glyma1 GGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVRRFPVSSTGQADNGSWMSQDESGD
                **.*********:**:*:***************:*:*:.*: .*      :  *.*:.* 

AT4G37180.1     LERESQSLISLSRSDSPQSPLV-----------ARGLFSSNVGHSSEEDEEEEDEEEEKS
gm029962_Glyma1 KSKGN----NMSQSGSPQGPLTPLILGGGGGGSAKGL--SSPGQNSVDGEDEQ-------
                 .: .    .:*:*.***.**.           *:**  *. *:.* :.*:*:       

AT4G37180.1     DGRSSCRN-------DETKKKRQVLDLEL
gm029962_Glyma1 ---SDCRNWKGGLHHHQLEADNQCL----
                   *.***       .: : ..* *
BoxShade v3.31 C (beta, 970507) Output
AT4G37180.1     M V Q T E T D Q R M G L N L N L S I Y S L P K P L S Q F L D E V S R I K D N H S K L S E I D G Y V G K L E E E R N K I D
gm029962_Glyma1    - - - - - - - - - M E L S L D L S L G F V P K P L S L F F A D V S A - - - N R D K V A T L D G F V Q R L E E E L K K V E
 
AT4G37180.1     V F K R E L P L C M L L L N E A I G A L K D E A R K - - G L S - - - L M A S N G K F D D V E R A K P E T D K K S W M S S
gm029962_Glyma1    A F K R E L P L C I L L L N D A I A R L K E E K V K C S G M Q D P P L K T S S G G - - - - - N K N E S S E K M N W M S S
 
AT4G37180.1     A Q L W I S N P N S Q F R S T N E E E E D R C V S Q N P F - - Q T C N Y P N Q G G V F M P F N R P P P P P P P A P L S L
gm029962_Glyma1    A Q L W - - - - S T Q K T K S R N E E D D R S V P A N P I N G N S C V L E K E G S - - - - - - - - - - - - - - - - - - -
 
AT4G37180.1     M T P T S E M M M D Y S R I E Q S H H H H Q F N K P S S Q S H H I Q - - - K K E Q R R R W S Q E L H R K F V D A L H R L
gm029962_Glyma1    Q V P R F G L M A R A S E L S H S N S K S V G G D I S S G S S L L R V E N P R K Q R R C W S P E L H R R F V D A L Q Q L
 
AT4G37180.1     G G P Q V A T P K Q I R D L M K V D G L T N D E V K S H L Q K Y R M H I R K H P L H P T - - - - - K T L S S S D Q P G V
gm029962_Glyma1    G G A Q V A T P K Q I R E L M Q V E G L T N D E V K S H L Q K Y R L H V R R F P V S S T G Q A D N G S W M S Q D E S G D
 
AT4G37180.1     L E R E S Q S L I S L S R S D S P Q S P L V - - - - - - - - - - - A R G L F S S N V G H S S E E D E E E E D E E E E K S
gm029962_Glyma1    K S K G N - - - - N M S Q S G S P Q G P L T P L I L G G G G G G S A K G L - - S S P G Q N S V D G E D E Q - - - - - - -
 
AT4G37180.1     D G R S S C R N - - - - - - - D E T K K K R Q V L D L E L
gm029962_Glyma1    - - - S D C R N W K G G L H H H Q L E A D N Q C L - - - -
 
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