fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G37260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000862 not found in 351aa AT4G37260.1 not_1st 0.506065857 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G37260.1     MSNPTRKNMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLS
pt000862_POPTR_ MAT-TRKEMDRIKGPWSPEEDEALKKLVQRHGPRNWSLISKSIPGRSGKSCRLRWCNQLS
                *:. ***:*:***********: *::***:******************************

AT4G37260.1     PEVEHRAFSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQS
pt000862_POPTR_ PQVEHRAFTPEEDDRIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMADD
                *:******: ***: ***************:************************  .:.

AT4G37260.1     CDFGGNGGYDGNL--GEEQPLKRTASGGGGV--STGLYMSPGSPSGSDVSEQSSGG---A
pt000862_POPTR_ GNLSNLEGYDGNLDVDDTQPSKRSVSAGSGVPLSTGLYMSPGSPSGSDVSDSSPPGLSSA
                 ::..  ******  .: ** **:.*.*.**  *****************:.*. *   *

AT4G37260.1     H---VFKPTVRSE------VTASSS---GEDPPTYLSLSLPWTDETVRV-NEPVQLNQNT
pt000862_POPTR_ HNHNIYRPVARTGGVLPPVETASSSDNNDDDPPTLLSLSLPGADPATKLPNRVVEPTHER
                *   :::*..*:        *****   .:**** ****** :* :.:: *. *: .:: 

AT4G37260.1     VMDGGYTAELFPVRKEEQVEVEEEEAK----------------------GISG----GFG
pt000862_POPTR_ V--AGSTQERVAGSTKERVAGSTQEPKPNTVTSFLVAADPAQVTTPVVAGQTGRPGCGFV
                *  .* * * ..  .:*:*  . :*.*                      * :*    ** 

AT4G37260.1     G---EFMTVVQEMIRTEVRSYMADLQRGNVGGSSSGGGGGGSCMPQSVNSRRVGFREFIV
pt000862_POPTR_ GLSRELMTVMQEMIRREVRNYMME------------QSGGGMCY-QGMSGE--GFRNVAV
                *   *:***:***** ***.** :             .*** *  *.:...  ***:. *

AT4G37260.1     NQIGIGKME
pt000862_POPTR_ NRVGVGKIE
                *::*:**:*
BoxShade v3.31 C (beta, 970507) Output
AT4G37260.1     M S N P T R K N M E R I K G P W S P E E D D L L Q R L V Q K H G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S
pt000862_POPTR_    M A T - T R K E M D R I K G P W S P E E D E A L K K L V Q R H G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S
 
AT4G37260.1     P E V E H R A F S Q E E D E T I I R A H A R F G N K W A T I S R L L N G R T D N A I K N H W N S T L K R K C S V E G Q S
pt000862_POPTR_    P Q V E H R A F T P E E D D R I I R A H A R F G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S S M A D D
 
AT4G37260.1     C D F G G N G G Y D G N L - - G E E Q P L K R T A S G G G G V - - S T G L Y M S P G S P S G S D V S E Q S S G G - - - A
pt000862_POPTR_    G N L S N L E G Y D G N L D V D D T Q P S K R S V S A G S G V P L S T G L Y M S P G S P S G S D V S D S S P P G L S S A
 
AT4G37260.1     H - - - V F K P T V R S E - - - - - - V T A S S S - - - G E D P P T Y L S L S L P W T D E T V R V - N E P V Q L N Q N T
pt000862_POPTR_    H N H N I Y R P V A R T G G V L P P V E T A S S S D N N D D D P P T L L S L S L P G A D P A T K L P N R V V E P T H E R
 
AT4G37260.1     V M D G G Y T A E L F P V R K E E Q V E V E E E E A K - - - - - - - - - - - - - - - - - - - - - - G I S G - - - - G F G
pt000862_POPTR_    V - - A G S T Q E R V A G S T K E R V A G S T Q E P K P N T V T S F L V A A D P A Q V T T P V V A G Q T G R P G C G F V
 
AT4G37260.1     G - - - E F M T V V Q E M I R T E V R S Y M A D L Q R G N V G G S S S G G G G G G S C M P Q S V N S R R V G F R E F I V
pt000862_POPTR_    G L S R E L M T V M Q E M I R R E V R N Y M M E - - - - - - - - - - - - Q S G G G M C Y - Q G M S G E - - G F R N V A V
 
AT4G37260.1     N Q I G I G K M E
pt000862_POPTR_    N R V G V G K I E
 
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