fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G37260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016180 VDPPTSLSLSLPGSIT in 195/311 AT5G67300.1 not_not 0.474870017 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G37260.1     MSNPTRKNMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLS
pt016180_POPTR_ MAS-SRKDVDRIKGPWSPEEDEALQRLVQTYGPRNWSLISKSIPGRSGKSCRLRWCNQLS
                *:. :**:::***********: ******.:*****************************

AT4G37260.1     PEVEHRAFSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQS
pt016180_POPTR_ PEVEHRPFSAEEDDTIIRAHARIGNKWATIARLLNGRTDNAIKNHWNSTLKRKCS-----
                ******.** ***:********:*******:************************     

AT4G37260.1     CDFGGNGGYD--GNLGEEQPLKRTASGGGGVSTGLYMSPGSPSGSDVSEQSSGGAH---V
pt016180_POPTR_ ------SMFDDLNDDAQQQPLKRSASLGAG--SGLHLNPSSPSGSDLSDSSIPGVNSSPV
                      . :*  .: .::*****:** *.*  :**::.*.******:*:.*  *.:   *

AT4G37260.1     FKPTVRS--------EVTASSSGEDPPTYLSLSLPWT-----------------DETVRV
pt016180_POPTR_ FRPPVKTASLVPPSLSIDVSSPTVDPPTSLSLSLPGSITCQAPGSGSSSGSHVVNPTPMV
                *:*.*::        .: .**.  **** ****** :                 : *  *

AT4G37260.1     NEPVQLNQNTVMDGGYTAELFPVRKEEQVEVEEEEAKGI---SGGFGGEFMTVVQEMIRT
pt016180_POPTR_ QTPAAPPQAAV----------AVQQQEQVSFLQQKNPGSRLENQFFSAEFLAVMQEMIRK
                : *.   * :*          .*:::***.. :::  *    .  *..**::*:*****.

AT4G37260.1     EVRSYMADLQRGNVGGSSSGGGGGGSCMPQSVNSRRVGFREFIVNQIGIGKME
pt016180_POPTR_ EVRNYMSGIEQ------------NGLCLGTE------AIRNAVVKRIGISRIE
                ***.**:.:::            .* *:  .      .:*: :*::***.::*
BoxShade v3.31 C (beta, 970507) Output
AT4G37260.1     M S N P T R K N M E R I K G P W S P E E D D L L Q R L V Q K H G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S
pt016180_POPTR_    M A S - S R K D V D R I K G P W S P E E D E A L Q R L V Q T Y G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S
 
AT4G37260.1     P E V E H R A F S Q E E D E T I I R A H A R F G N K W A T I S R L L N G R T D N A I K N H W N S T L K R K C S V E G Q S
pt016180_POPTR_    P E V E H R P F S A E E D D T I I R A H A R I G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S - - - - -
 
AT4G37260.1     C D F G G N G G Y D - - G N L G E E Q P L K R T A S G G G G V S T G L Y M S P G S P S G S D V S E Q S S G G A H - - - V
pt016180_POPTR_    - - - - - - S M F D D L N D D A Q Q Q P L K R S A S L G A G - - S G L H L N P S S P S G S D L S D S S I P G V N S S P V
 
AT4G37260.1     F K P T V R S - - - - - - - - E V T A S S S G E D P P T Y L S L S L P W T - - - - - - - - - - - - - - - - - D E T V R V
pt016180_POPTR_    F R P P V K T A S L V P P S L S I D V S S P T V D P P T S L S L S L P G S I T C Q A P G S G S S S G S H V V N P T P M V
 
AT4G37260.1     N E P V Q L N Q N T V M D G G Y T A E L F P V R K E E Q V E V E E E E A K G I - - - S G G F G G E F M T V V Q E M I R T
pt016180_POPTR_    Q T P A A P P Q A A V - - - - - - - - - - A V Q Q Q E Q V S F L Q Q K N P G S R L E N Q F F S A E F L A V M Q E M I R K
 
AT4G37260.1     E V R S Y M A D L Q R G N V G G S S S G G G G G G S C M P Q S V N S R R V G F R E F I V N Q I G I G K M E
pt016180_POPTR_    E V R N Y M S G I E Q - - - - - - - - - - - - N G L C L G T E - - - - - - A I R N A V V K R I G I S R I E
 
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