fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G37260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037616 NDPPTSLSLSLPGADS in 213/330 AT4G37260.1 1st_1st 0.523396880 Ia
Pt000862 not found in 351aa AT4G37260.1 not_1st 0.506065857 II
Pt016180 VDPPTSLSLSLPGSIT in 195/311 AT5G67300.1 not_not 0.474870017 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G37260.1     MSNPTRKNMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLS
pt037616_POPTR_ MAI-TRKEMDRIKGPWSPEEDEALQKLVQKHGARNWSLISKSIPGRSGKSCRLRWCNQLS
pt016180_POPTR_ MAS-SRKDVDRIKGPWSPEEDEALQRLVQTYGPRNWSLISKSIPGRSGKSCRLRWCNQLS
pt000862_POPTR_ MAT-TRKEMDRIKGPWSPEEDEALKKLVQRHGPRNWSLISKSIPGRSGKSCRLRWCNQLS
                *:  :**:::***********: *::*** :*.***************************

AT4G37260.1     PEVEHRAFSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQS
pt037616_POPTR_ PQVEHRPFTPDEDDTIIRAHARFGNKWATIARLLYGRTDNAIKNHWNSTLKRKCSSMAED
pt016180_POPTR_ PEVEHRPFSAEEDDTIIRAHARIGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMFDD
pt000862_POPTR_ PQVEHRAFTPEEDDRIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMADD
                *:****.*: :**: *******:*******:*** ********************   :.

AT4G37260.1     CDFGGNGGYDGNL--GEEQPLKRTASGGGG--VSTGLYMSPGSPSGSDVSEQSSGGA---
pt037616_POPTR_ GNFCNREGYDGNLDGDNTQPLKRSVSAGSGVPVSTGLYMSPGSPSGSDVSDSSLPGLSSS
pt016180_POPTR_ LN-----------DDAQQQPLKRSASLGAG----SGLHLNPSSPSGSDLSDSSIPGVNSS
pt000862_POPTR_ GNLSNLEGYDGNLDVDDTQPSKRSVSAGSGVPLSTGLYMSPGSPSGSDVSDSSPPGLSSA
                 :              : ** **:.* *.*    :**::.*.******:*:.*  *    

AT4G37260.1     ---HVFKPTVRS--------EVTASSSG-EDPPTYLSLSLPWTDETV----------RVN
pt037616_POPTR_ YNYNIYRPVARTGAVMPPVETTSSSDNN-NDPPTSLSLSLPGAD-------SSEVSNQVG
pt016180_POPTR_ ---PVFRPPVKTASLVPPSLSIDVSSPT-VDPPTSLSLSLPGSITCQAPGSGSSSGSHVV
pt000862_POPTR_ HNHNIYRPVARTGGVLPPVETASSSDNNDDDPPTLLSLSLPGAD------PATKLPNRVV
                    :::* .::            *.    **** ****** :              :* 

AT4G37260.1     EPVQLNQNTVMDGGYTAELFPVRKEEQVEVEEEEAK-----------------------G
pt037616_POPTR_ EP-----------------------------SQLPKSNTVTPLLTGRNAPAQEVSPAVGG
pt016180_POPTR_ NPTPMVQTP---AAPPQAAVAVQQQEQV-------------SFLQQKN-PGSRLEN----
pt000862_POPTR_ EPTH--ERV---AGSTQERVAGSTKERVAGSTQEPKPNTVTSFLVAAD-PAQVTTPVVAG
                :*                                                          

AT4G37260.1     ISG-------GFGGEFMTVVQEMIRTEVRSYMADLQRGNVGGSSSGGGGGGSCMPQSVNS
pt037616_POPTR_ LSGS-----VGFNTEFMSVMQEMIRKEVRNYM--MEHSGV--------GGGMCY-QGMSG
pt016180_POPTR_ ---------QFFSAEFLAVMQEMIRKEVRNYMSGIEQN------------GLC----LGT
pt000862_POPTR_ QTGRPGCGFVGLSRELMTVMQEMIRREVRNYM--MEQS----------GGGMCY-QGMSG
                           :. *:::*:***** ***.**  :::.            * *    :. 

AT4G37260.1     RRVGFREFIV-NQIGIGKME------
pt037616_POPTR_ E--GFRNVAVNNRVGLVKLSSEKWTG
pt016180_POPTR_ E--AIRNAVV-KRIGISRIE------
pt000862_POPTR_ E--GFRNVAV-NRVGVGKIE------
                .  .:*:  * :::*: ::.
BoxShade v3.31 C (beta, 970507) Output
AT4G37260.1     M S N P T R K N M E R I K G P W S P E E D D L L Q R L V Q K H G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S
pt037616_POPTR_    M A I - T R K E M D R I K G P W S P E E D E A L Q K L V Q K H G A R N W S L I S K S I P G R S G K S C R L R W C N Q L S
pt016180_POPTR_    M A S - S R K D V D R I K G P W S P E E D E A L Q R L V Q T Y G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S
pt000862_POPTR_    M A T - T R K E M D R I K G P W S P E E D E A L K K L V Q R H G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S
 
AT4G37260.1     P E V E H R A F S Q E E D E T I I R A H A R F G N K W A T I S R L L N G R T D N A I K N H W N S T L K R K C S V E G Q S
pt037616_POPTR_    P Q V E H R P F T P D E D D T I I R A H A R F G N K W A T I A R L L Y G R T D N A I K N H W N S T L K R K C S S M A E D
pt016180_POPTR_    P E V E H R P F S A E E D D T I I R A H A R I G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S S M F D D
pt000862_POPTR_    P Q V E H R A F T P E E D D R I I R A H A R F G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S S M A D D
 
AT4G37260.1     C D F G G N G G Y D G N L - - G E E Q P L K R T A S G G G G - - V S T G L Y M S P G S P S G S D V S E Q S S G G A - - -
pt037616_POPTR_    G N F C N R E G Y D G N L D G D N T Q P L K R S V S A G S G V P V S T G L Y M S P G S P S G S D V S D S S L P G L S S S
pt016180_POPTR_    L N - - - - - - - - - - - D D A Q Q Q P L K R S A S L G A G - - - - S G L H L N P S S P S G S D L S D S S I P G V N S S
pt000862_POPTR_    G N L S N L E G Y D G N L D V D D T Q P S K R S V S A G S G V P L S T G L Y M S P G S P S G S D V S D S S P P G L S S A
 
AT4G37260.1     - - - H V F K P T V R S - - - - - - - - E V T A S S S G - E D P P T Y L S L S L P W T D E T V - - - - - - - - - - R V N
pt037616_POPTR_    Y N Y N I Y R P V A R T G A V M P P V E T T S S S D N N - N D P P T S L S L S L P G A D - - - - - - - S S E V S N Q V G
pt016180_POPTR_    - - - P V F R P P V K T A S L V P P S L S I D V S S P T - V D P P T S L S L S L P G S I T C Q A P G S G S S S G S H V V
pt000862_POPTR_    H N H N I Y R P V A R T G G V L P P V E T A S S S D N N D D D P P T L L S L S L P G A D - - - - - - P A T K L P N R V V
 
AT4G37260.1     E P V Q L N Q N T V M D G G Y T A E L F P V R K E E Q V E V E E E E A K - - - - - - - - - - - - - - - - - - - - - - - G
pt037616_POPTR_    E P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S Q L P K S N T V T P L L T G R N A P A Q E V S P A V G G
pt016180_POPTR_    N P T P M V Q T P - - - A A P P Q A A V A V Q Q Q E Q V - - - - - - - - - - - - - S F L Q Q K N - P G S R L E N - - - -
pt000862_POPTR_    E P T H - - E R V - - - A G S T Q E R V A G S T K E R V A G S T Q E P K P N T V T S F L V A A D - P A Q V T T P V V A G
 
AT4G37260.1     I S G - - - - - - - G F G G E F M T V V Q E M I R T E V R S Y M A D L Q R G N V G G S S S G G G G G G S C M P Q S V N S
pt037616_POPTR_    L S G S - - - - - V G F N T E F M S V M Q E M I R K E V R N Y M - - M E H S G V - - - - - - - - G G G M C Y - Q G M S G
pt016180_POPTR_    - - - - - - - - - Q F F S A E F L A V M Q E M I R K E V R N Y M S G I E Q N - - - - - - - - - - - - G L C - - - - L G T
pt000862_POPTR_    Q T G R P G C G F V G L S R E L M T V M Q E M I R R E V R N Y M - - M E Q S - - - - - - - - - - G G G M C Y - Q G M S G
 
AT4G37260.1     R R V G F R E F I V - N Q I G I G K M E - - - - - -
pt037616_POPTR_    E - - G F R N V A V N N R V G L V K L S S E K W T G
pt016180_POPTR_    E - - A I R N A V V - K R I G I S R I E - - - - - -
pt000862_POPTR_    E - - G F R N V A V - N R V G V G K I E - - - - - -
 
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