fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G37540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp021737 GNGAEQLELDLTLKVK in 294/365 AT5G67420.1 1st_not 0.403225806 II
Pp032887 not found in 282aa AT5G67420.1 not_not 0.401209677 III
Pp032886 VGSTEHLDLGLTLKVK in 288/356 AT5G67420.1 not_not 0.401209677 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT4G37540.1     MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR
pp032887_Pp1s16 MSCNGCRVLRKGCSESCILRPCLQWIDSADAQGHATVFVAKFFGRAGLMSFITAVPENQR
pp021737_Pp1s41 MSCNGCRVLRKGCSDNCILRPCLQWIETSEAQGHATVFVAKFFGRAGLMGFISAVPENQR
pp032886_Pp1s16 MSCNGCRVLRKGCSESCILRPCLQWIDSADAQGHATVFVAKFFGRAGLMSFITAVPENQR
                **************:.**********:::::******************.**::*** **

AT4G37540.1     PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPIS-DLL-----
pp032887_Pp1s16 PALFQSLLYEACGRTVNPVFGAVGLLWAGNWQVCQAAVETVLKGGVLKAPSSCSLGFSAL
pp021737_Pp1s41 SALFQSLLYEACGRTVNPVFGAVGLLWSGNWQICQAAVDTVLKGGTLRPSSPSSL-----
pp032886_Pp1s16 PALFQSLLYEACGRTVNPVFGAVGLLWAGNWQVCQAAVETVLKGGVLKAPSSCSLGFSAL
                .*******:********** ****:**: **::*****:***:**.*:. *   *     

AT4G37540.1     ------ES-----------------PSL--------------------------------
pp032887_Pp1s16 PQGLLHPSNPGKDTSVTSKGRDSLLPSL------ITSAKGNIPDLCKVRVGA-GPI---L
pp021737_Pp1s41 ------PSYTSANLSFAA----PCFPALAMPGNFATPAAGKVDDPIQITLSSNAPAENSL
pp032886_Pp1s16 PQGLLHPSNPGKDTSVTSKGRDSLLPSL------ITSAKGNIPDLCKVRVGA-GPI---L
                       *                 *:*                                

AT4G37540.1     ----------------------MISCDE-------SSEIW--H------QDVSRNQT---
pp032887_Pp1s16 EQYQRTNGYESKDHDAAA----VKSSWDRKWDINVQQQEWPKH------QQLDTAKG-NV
pp021737_Pp1s41 DQHTVSLGIGLPEDNYAVSNERLISCHDK-----MNSGSW--HSEAVVAQNMETNSTWRN
pp032886_Pp1s16 EQYQRTNGYESKDHDAAA----VKSSWDRKWDINVQQQEWPKH------QQLDTAKG-NV
                                      : *. :       ..  *  *      *::.  .    

AT4G37540.1     ---------------H-----------HCRFSTSRSTTEMKDSLV---NRKRLKSDSDLD
pp032887_Pp1s16 KSHMVAWPEALGNIVHKVGE--------------KRDRDFSGAQV---------------
pp021737_Pp1s41 DGQCDNW-----NPLHSAGEFQRDGLGHKSNELKQRGTHMRGEYV---TPRRVKGRVQAS
pp032886_Pp1s16 KSHMVAWPEALGNIVHKVGE--------------KRDRDFSGAQVLVPAPRRLKP----C
                               *                  :   .: .  *               

AT4G37540.1     LQVNHGLTLTA----PAVPVPF-------LPPSSFCKVVKGD------RPGSP-----SE
pp032887_Pp1s16 ----------------------------------QVYFGKGLCINAMLCTLSQS-CLSSC
pp021737_Pp1s41 PEANF---LSGERACEELPVPGNGAEQLELDLTLKVKGVKGEKTVGNKRQSSPCDSVKSE
pp032886_Pp1s16 LAIEYGMSMKECAVYDDQETVVGSTEHLDLGLTLKVKDGKGGQITGFKTVYSPSDSVNSE
                                                       **          *      * 

AT4G37540.1     ESVTT-------------SC-WENGMRGDNKQKRNKGEKKLLNLFV
pp032887_Pp1s16 GPM--LDTS-------------------------------------
pp021737_Pp1s41 GSVTSLDSS---VHEPPKPCNWALEMSLMPPTFRT-----LLPLMQ
pp032886_Pp1s16 GSVTSLDTTPRHVHHTS----FSSPMSGGD------MDRKLLLLL-
                 .:
BoxShade v3.31 C (beta, 970507) Output
AT4G37540.1     M S C N G C R V L R K G C S E T C I L R P C L Q W I E S A E S Q G H A T V F V A K F F G R A G L M S F I S S V P E L Q R
pp032887_Pp1s16    M S C N G C R V L R K G C S E S C I L R P C L Q W I D S A D A Q G H A T V F V A K F F G R A G L M S F I T A V P E N Q R
pp021737_Pp1s41    M S C N G C R V L R K G C S D N C I L R P C L Q W I E T S E A Q G H A T V F V A K F F G R A G L M G F I S A V P E N Q R
pp032886_Pp1s16    M S C N G C R V L R K G C S E S C I L R P C L Q W I D S A D A Q G H A T V F V A K F F G R A G L M S F I T A V P E N Q R
 
AT4G37540.1     P A L F Q S L L F E A C G R T V N P V N G A V G M L W T R N W H V C Q A A V E T V L R G G T L R P I S - D L L - - - - -
pp032887_Pp1s16    P A L F Q S L L Y E A C G R T V N P V F G A V G L L W A G N W Q V C Q A A V E T V L K G G V L K A P S S C S L G F S A L
pp021737_Pp1s41    S A L F Q S L L Y E A C G R T V N P V F G A V G L L W S G N W Q I C Q A A V D T V L K G G T L R P S S P S S L - - - - -
pp032886_Pp1s16    P A L F Q S L L Y E A C G R T V N P V F G A V G L L W A G N W Q V C Q A A V E T V L K G G V L K A P S S C S L G F S A L
 
AT4G37540.1     - - - - - - E S - - - - - - - - - - - - - - - - - P S L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp032887_Pp1s16    P Q G L L H P S N P G K D T S V T S K G R D S L L P S L - - - - - - I T S A K G N I P D L C K V R V G A - G P I - - - L
pp021737_Pp1s41    - - - - - - P S Y T S A N L S F A A - - - - P C F P A L A M P G N F A T P A A G K V D D P I Q I T L S S N A P A E N S L
pp032886_Pp1s16    P Q G L L H P S N P G K D T S V T S K G R D S L L P S L - - - - - - I T S A K G N I P D L C K V R V G A - G P I - - - L
 
AT4G37540.1     - - - - - - - - - - - - - - - - - - - - - - M I S C D E - - - - - - - S S E I W - - H - - - - - - Q D V S R N Q T - - -
pp032887_Pp1s16    E Q Y Q R T N G Y E S K D H D A A A - - - - V K S S W D R K W D I N V Q Q Q E W P K H - - - - - - Q Q L D T A K G - N V
pp021737_Pp1s41    D Q H T V S L G I G L P E D N Y A V S N E R L I S C H D K - - - - - M N S G S W - - H S E A V V A Q N M E T N S T W R N
pp032886_Pp1s16    E Q Y Q R T N G Y E S K D H D A A A - - - - V K S S W D R K W D I N V Q Q Q E W P K H - - - - - - Q Q L D T A K G - N V
 
AT4G37540.1     - - - - - - - - - - - - - - - H - - - - - - - - - - - H C R F S T S R S T T E M K D S L V - - - N R K R L K S D S D L D
pp032887_Pp1s16    K S H M V A W P E A L G N I V H K V G E - - - - - - - - - - - - - - K R D R D F S G A Q V - - - - - - - - - - - - - - -
pp021737_Pp1s41    D G Q C D N W - - - - - N P L H S A G E F Q R D G L G H K S N E L K Q R G T H M R G E Y V - - - T P R R V K G R V Q A S
pp032886_Pp1s16    K S H M V A W P E A L G N I V H K V G E - - - - - - - - - - - - - - K R D R D F S G A Q V L V P A P R R L K P - - - - C
 
AT4G37540.1     L Q V N H G L T L T A - - - - P A V P V P F - - - - - - - L P P S S F C K V V K G D - - - - - - R P G S P - - - - - S E
pp032887_Pp1s16    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q V Y F G K G L C I N A M L C T L S Q S - C L S S C
pp021737_Pp1s41    P E A N F - - - L S G E R A C E E L P V P G N G A E Q L E L D L T L K V K G V K G E K T V G N K R Q S S P C D S V K S E
pp032886_Pp1s16    L A I E Y G M S M K E C A V Y D D Q E T V V G S T E H L D L G L T L K V K D G K G G Q I T G F K T V Y S P S D S V N S E
 
AT4G37540.1     E S V T T - - - - - - - - - - - - - S C - W E N G M R G D N K Q K R N K G E K K L L N L F V
pp032887_Pp1s16    G P M - - L D T S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp021737_Pp1s41    G S V T S L D S S - - - V H E P P K P C N W A L E M S L M P P T F R T - - - - - L L P L M Q
pp032886_Pp1s16    G S V T S L D T T P R H V H H T S - - - - F S S P M S G G D - - - - - - M D R K L L L L L -
 
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