fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G37780.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037070 not found in 343aa AT3G49690.1 1st_not 0.424460431 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G37780.1     MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN
pt037070_POPTR_ MGRAPCCDKANVKKGPWSPEEDAILKAYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLN
                *********  *******.****:**:***:****.***:***:**:*************

AT4G37780.1     YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLSK
pt037070_POPTR_ YLRPNIKHGGFSEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGK
                *****:*****::*** *******:*********:***********************.*

AT4G37780.1     QGK-------AFHQQLNVKFE-------RGTTSSSSS------------QNQIQIFHDEN
pt037070_POPTR_ QRKEQAARRASLKQEIMTKREINESFMVPGAIPHQQSPYWPEVPALVMNQNQ-----DSH
                * *       :::*:: .* *        *: . ..*            ***     *.:

AT4G37780.1     TKSNQTLYNQVVDPSMRAFAMEEQ-----SMIKNQILEPFSWEPNKVLFDVDYDAAASSY
pt037070_POPTR_ LMDQESIRNLLIKLGGR-FSDNNQESALFTTINNYPLDGSSRQ-DQVPYTNSIDVLSSS-
                  .:::: * ::. . * *: ::*     : *:*  *:  * : ::* :  . *. :** 

AT4G37780.1     HHHASPSLNSMSSTSSIGTNNSSLQMSHYTVNHNDHDQPDMFFMDGFENFQAELFDEIAN
pt037070_POPTR_ ----AP-MRSMDSTCCSQFPNS------------NYNGPNM-CQAGLENLLVELGGLVCS
                    :* :.**.**..    **            ::: *:*    *:**: .** . :..

AT4G37780.1     NNTVENGFD---GTEILIN---------NNYLDHDISSFIDYP--LYDNE----------
pt037070_POPTR_ NPQRVEGLDSFYGMDMAASGSTGASSAESNSWGH-ISS-LGYPQLVSDYETCLQSMPQDS
                *    :*:*   * ::  .         .*  .* *** :.**  : * *          

AT4G37780.1     -----------
pt037070_POPTR_ SFEDSSFFGPH
BoxShade v3.31 C (beta, 970507) Output
AT4G37780.1     M G R A P C C D K M A V K K G P W S T E E D A V L K S Y I E K H G T G N N W I S L P Q R I G I K R C G K S C R L R W L N
pt037070_POPTR_    M G R A P C C D K A N V K K G P W S P E E D A I L K A Y I E Q H G T G G N W I A L P Q K I G L K R C G K S C R L R W L N
 
AT4G37780.1     Y L R P N L K H G G F T D E E D Y I I C S L Y I T I G S R W S I I A S Q L P G R T D N D I K N Y W N T R L K K K L L S K
pt037070_POPTR_    Y L R P N I K H G G F S E E E D N I I C S L Y I S I G S R W S I I A A Q L P G R T D N D I K N Y W N T R L K K K L L G K
 
AT4G37780.1     Q G K - - - - - - - A F H Q Q L N V K F E - - - - - - - R G T T S S S S S - - - - - - - - - - - - Q N Q I Q I F H D E N
pt037070_POPTR_    Q R K E Q A A R R A S L K Q E I M T K R E I N E S F M V P G A I P H Q Q S P Y W P E V P A L V M N Q N Q - - - - - D S H
 
AT4G37780.1     T K S N Q T L Y N Q V V D P S M R A F A M E E Q - - - - - S M I K N Q I L E P F S W E P N K V L F D V D Y D A A A S S Y
pt037070_POPTR_    L M D Q E S I R N L L I K L G G R - F S D N N Q E S A L F T T I N N Y P L D G S S R Q - D Q V P Y T N S I D V L S S S -
 
AT4G37780.1     H H H A S P S L N S M S S T S S I G T N N S S L Q M S H Y T V N H N D H D Q P D M F F M D G F E N F Q A E L F D E I A N
pt037070_POPTR_    - - - - A P - M R S M D S T C C S Q F P N S - - - - - - - - - - - - N Y N G P N M - C Q A G L E N L L V E L G G L V C S
 
AT4G37780.1     N N T V E N G F D - - - G T E I L I N - - - - - - - - - N N Y L D H D I S S F I D Y P - - L Y D N E - - - - - - - - - -
pt037070_POPTR_    N P Q R V E G L D S F Y G M D M A A S G S T G A S S A E S N S W G H - I S S - L G Y P Q L V S D Y E T C L Q S M P Q D S
 
AT4G37780.1     - - - - - - - - - - -
pt037070_POPTR_    S F E D S S F F G P H
 
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