fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT4G37780.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020145 not found in 349aa AT5G57620.1 1st_not 0.410071942 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT4G37780.1     --------MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGK
Sb020145_Sorbi1 ERKTEDYAMGRAPCCDKATVKKGPWSPEEDAKLKSYIEQNGTGGNWIALPQKIGLKRCGK
                        ********* :*******.**** ******::***.***:***:**:*****

AT4G37780.1     SCRLRWLNYLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTR
Sb020145_Sorbi1 SCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTR
                *************:*****::*** ** ****:*********:*****************

AT4G37780.1     LKKKLLSKQGKAFHQQLNVKFERGTTSSSSSQNQIQIFHDENTKSNQTLYNQVVDPS---
Sb020145_Sorbi1 LKKKLFGKQ------------------SRKDQRQHQFMRQQAAAANDGMMKQEAAATGDA
                *****:.**                  * ..*.* *::::: : :*: : :* . .:   

AT4G37780.1     -------MRAFAMEEQSM-------IKNQILEPFSWEPN--------KVLFDVD------
Sb020145_Sorbi1 AGSSSMAVASYNWHHQAMAAMPVQPIPGSIME--GHRPGDEVDESIRKLLYKLGGAGPFT
                       : ::  ..*:*       * ..*:*  . .*.        *:*:.:.      

AT4G37780.1     -----------YDAAASSYHHHAS-PSLNSMSSTSSIGTNNSSL-------QMSHYTVNH
Sb020145_Sorbi1 ALSVPQCVPPMYEGSPGLMPPPSSCPAVDAGTSLDEGGVQGSSVLPALELDQGFHF----
                           *:.:..     :* *:::: :* .. *.:.**:       *  *:    

AT4G37780.1     NDHDQPDMFFMDGFENF------QAELFDEIA-----NNNTVENGFDGTEILINNNYLDH
Sb020145_Sorbi1 ------NQVKLDGLESFFGIGTDQSMRWSEVSPLICPNNNVAASTSQGMQ----------
                      : . :**:*.*      *:  :.*::     ***.. .  :* :          

AT4G37780.1     DISSFIDYPLYDNE-------
Sb020145_Sorbi1 ------QYCLAVDEPGNLGMK
                      :* *  :*
BoxShade v3.31 C (beta, 970507) Output
AT4G37780.1     - - - - - - - - M G R A P C C D K M A V K K G P W S T E E D A V L K S Y I E K H G T G N N W I S L P Q R I G I K R C G K
Sb020145_Sorbi1    E R K T E D Y A M G R A P C C D K A T V K K G P W S P E E D A K L K S Y I E Q N G T G G N W I A L P Q K I G L K R C G K
 
AT4G37780.1     S C R L R W L N Y L R P N L K H G G F T D E E D Y I I C S L Y I T I G S R W S I I A S Q L P G R T D N D I K N Y W N T R
Sb020145_Sorbi1    S C R L R W L N Y L R P N I K H G G F S E E E D R I I L S L Y I S I G S R W S I I A A Q L P G R T D N D I K N Y W N T R
 
AT4G37780.1     L K K K L L S K Q G K A F H Q Q L N V K F E R G T T S S S S S Q N Q I Q I F H D E N T K S N Q T L Y N Q V V D P S - - -
Sb020145_Sorbi1    L K K K L F G K Q - - - - - - - - - - - - - - - - - - S R K D Q R Q H Q F M R Q Q A A A A N D G M M K Q E A A A T G D A
 
AT4G37780.1     - - - - - - - M R A F A M E E Q S M - - - - - - - I K N Q I L E P F S W E P N - - - - - - - - K V L F D V D - - - - - -
Sb020145_Sorbi1    A G S S S M A V A S Y N W H H Q A M A A M P V Q P I P G S I M E - - G H R P G D E V D E S I R K L L Y K L G G A G P F T
 
AT4G37780.1     - - - - - - - - - - - Y D A A A S S Y H H H A S - P S L N S M S S T S S I G T N N S S L - - - - - - - Q M S H Y T V N H
Sb020145_Sorbi1    A L S V P Q C V P P M Y E G S P G L M P P P S S C P A V D A G T S L D E G G V Q G S S V L P A L E L D Q G F H F - - - -
 
AT4G37780.1     N D H D Q P D M F F M D G F E N F - - - - - - Q A E L F D E I A - - - - - N N N T V E N G F D G T E I L I N N N Y L D H
Sb020145_Sorbi1    - - - - - - N Q V K L D G L E S F F G I G T D Q S M R W S E V S P L I C P N N N V A A S T S Q G M Q - - - - - - - - - -
 
AT4G37780.1     D I S S F I D Y P L Y D N E - - - - - - -
Sb020145_Sorbi1    - - - - - - Q Y C L A V D E P G N L G M K
 
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